Mathias Brochhausen

Sourced from institutional research profiles (UAMS TRI or ARA).

Federal Grant PI High Impact

Researcher

UAMS

Also affiliated: Universidade Federal de Minas Gerais (2017); University of Arkansas Medical Center (2013–2023); University of Florida Health (2019–2021); Baze University (2023); University of Florida (2020); Cal Humanities (2023); University of Regensburg (2021); University of Florida Health Science Center (2020); Nokia (United States) (2023); Saarland University (2007–2012)

Faculty Researcher

21 h-index 136 pubs 1,671 cited

Research Areas

Biomedical Subjects

Links

ORCID Lab Website UAMS TRI Profile

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OverviewAI-generated summary

Mathias Brochhausen's research focuses on the application of computational methods, ontologies, and artificial intelligence to address challenges in health sciences and data management. He has investigated the development and assessment of software for processing complex biological data, such as LC-HRMS metabolomics data, with an emphasis on FAIR (Findable, Accessible, Interoperable, Reusable) principles to enhance research reproducibility.

His work also explores the integration of diverse data domains within transformed health ecosystems, addressing the linguistic and ontological challenges inherent in such complex systems. Brochhausen has contributed to the standardization of biomedical data representation through ontologies, including the Ontology for Biomedical Investigations. He has also examined the need for semantic data integration for specialized biobanks from a knowledge representation perspective and investigated the relationship between information models and realism-based ontologies.

Brochhausen is a principal investigator on federally funded research, including a $454,259 grant from the NIH/National Institute of General Medical Sciences for the Trauma Institutional Priorities and Teams for Outcome Efficacy (TIPTOE) project. His scholarship metrics include an h-index of 21, with 1,648 total citations across 135 publications. He actively collaborates with researchers at the University of Arkansas for Medical Sciences, including Justin M. Whorton, Jonathan P. Bona, Joseph Utecht, and Cilia E. Zayas.

Metrics

h-index: 21
Publications: 136
Citations: 1,671

Selected Publications

mcwdsi/OMRSE: v2026-07-08 (2026)

Zenodo (CERN European Organization for Nuclear Research) DOI OpenAlex
Ontology-Aligned Representation of Adverse Events in a Multiple Myeloma Clinical Trial (2026)

Studies in health technology and informatics DOI OpenAlex
mcwdsi/OMRSE: v2026-07-08 (2026)

Zenodo (CERN European Organization for Nuclear Research) DOI OpenAlex
mcwdsi/OMRSE: v2026-04-07 (2026)

Zenodo (CERN European Organization for Nuclear Research) DOI OpenAlex
Enhancing Clinical Note Generation with ICD-10, Clinical Ontology Knowledge Graphs, and Chain-of-Thought Prompting Using GPT-4 (2026)

Journal of Computational Biology DOI OpenAlex
Generation of Interactive Knowledge Graphs to Enable Research of the Effects of Trauma Center Organization on Patient Outcomes (2025)

Lecture notes in computer science DOI OpenAlex
Nextflow4MS-DIAL: A Reproducible Nextflow-Based Workflow for Liquid Chromatography–Mass Spectrometry Metabolomics Data Processing (2025)

Journal of the American Society for Mass Spectrometry 6 citations DOI OpenAlex
Expanding the Ontology of Organizational Structures of Trauma Centers and Trauma Systems. (2024)

PubMed OpenAlex
The Representational Challenge of Integration and Interoperability in Transformed Health Ecosystems (2024)

Journal of Personalized Medicine 4 citations DOI OpenAlex
The Representational Challenge for Designing and Managing 5P Medicine Ecosystems (2024)

Studies in health technology and informatics 4 citations DOI OpenAlex
An Automated Workflow Composition System for Liquid Chromatography–Mass Spectrometry Metabolomics Data Processing (2023)

Journal of the American Society for Mass Spectrometry 1 citation DOI OpenAlex
Development and validation of the early warning system scores ontology (2023)

Journal of Biomedical Semantics 4 citations DOI OpenAlex
Designing and Managing Advanced, Intelligent and Ethical Health and Social Care Ecosystems (2023)

Journal of Personalized Medicine 5 citations DOI OpenAlex
235 Use of Community Review Boards to Evaluate the Utility of the ICF Navigator - A Browser-based Tool to Create Plain-Language Informed Consent Forms (2023)

Journal of Clinical and Translational Science 1 citation DOI OpenAlex
Linguistic and ontological challenges of multiple domains contributing to transformed health ecosystems (2023)

Frontiers in Medicine 11 citations DOI OpenAlex