Bradley T. Martin
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Assistant Professor
Also affiliated: University of Southern California (2023); Seton Hall University (2024); University of Miami (2017); Flinders University (2024); The University of Texas at Tyler (2013); Children's Hospital at Westmead (2005); UNSW Sydney (2008); Complejo Hospitalario de Navarra (2013); Sydney Children's Hospital (2008–2022)
Faculty Researcher
Research Areas
Biomedical Subjects
Links
Biography and Research Information
OverviewAI-generated summary
Bradley T. Martin's research investigates the application of genomic and machine learning techniques to understand biodiversity and genetic speciation. His work has focused on species delimitation within various animal groups, including the *Gila robusta* complex and North American box turtles (Terrapene spp.). He has developed computational tools, such as the R package ClineHelpR for genomic cline outlier detection and the deep learning approach GeoGenIE for predicting the geographic provenance of biodiversity samples. Martin's recent publications also explore the role of biological structures, like razor clam graveyards, in driving epibenthic biodiversity and the influence of historical and contemporary selection on conservation units for endemic species in altered riverscapes. His scholarship metrics include an h-index of 9 with 29 publications and 280 citations. Martin collaborates frequently with researchers at the University of Arkansas at Fayetteville, including Michael E. Douglas and Tyler K. Chafin.
Metrics
- h-index: 9
- Publications: 29
- Citations: 281
Selected Publications
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Historic and contemporary selection define conservation units for a short-range endemic within an anthropogenically-altered riverscape (2025)
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GeoGenIE: a deep learning approach to predict geographic provenance of biodiversity samples from genomic SNPs (2024)
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Relictual Hybridization and Biogeography of Massasauga Rattlesnakes ( <i>Sistrurus</i> spp.) (2022)
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ClineHelpR: an R package for genomic cline outlier detection and visualization (2021)
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Taxonomic Uncertainty and the Anomaly Zone: Phylogenomics Disentangle a Rapid Radiation to Resolve Contentious Species ( <i>Gila robusta</i> Complex) in the Colorado River (2021)
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The choices we make and the impacts they have: Machine learning and species delimitation in North American box turtles ( <i>Terrapene</i> spp.) (2021)
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Spatial population genetics in heavily managed species: Separating patterns of historical translocation from contemporary gene flow in white‐tailed deer (2021)
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The choices we make and the impacts they have: Machine learning and species delimitation in North American box turtles ( <i>Terrapene</i> spp.) (2020)
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Age structuring and spatial heterogeneity in prion protein gene ( <i>PRNP</i> ) polymorphism in white-tailed deer (2020)
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ClinePlotR: Visualizing genomic clines and detecting outliers in R (2020)
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Contrasting signatures of introgression in North American box turtle ( <i>Terrapene</i> spp.) contact zones (2020)
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Age structuring and spatial heterogeneity in prion protein gene ( <i>PRNP</i> ) polymorphism in white-tailed deer (2020)
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Contrasting signatures of introgression in North American box turtle ( <i>Terrapene</i> spp.) contact zones (2019)
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Hybridization drives genetic erosion in sympatric desert fishes of western North America (2019)
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Hybridization drives genetic erosion in sympatric desert fishes of western North America (2019)
Collaboration Network
Top Collaborators
- Taxonomic Uncertainty and the Anomaly Zone: Phylogenomics Disentangle a Rapid Radiation to Resolve Contentious Species ( <i>Gila robusta</i> Complex) in the Colorado River
- The choices we make and the impacts they have: Machine learning and species delimitation in North American box turtles ( <i>Terrapene</i> spp.)
- ClineHelpR: an R package for genomic cline outlier detection and visualization
- Relictual Hybridization and Biogeography of Massasauga Rattlesnakes ( <i>Sistrurus</i> spp.)
- Historic and contemporary selection define conservation units for a short-range endemic within an anthropogenically-altered riverscape
Showing 5 of 6 shared publications
- Taxonomic Uncertainty and the Anomaly Zone: Phylogenomics Disentangle a Rapid Radiation to Resolve Contentious Species ( <i>Gila robusta</i> Complex) in the Colorado River
- The choices we make and the impacts they have: Machine learning and species delimitation in North American box turtles ( <i>Terrapene</i> spp.)
- ClineHelpR: an R package for genomic cline outlier detection and visualization
- Relictual Hybridization and Biogeography of Massasauga Rattlesnakes ( <i>Sistrurus</i> spp.)
- Historic and contemporary selection define conservation units for a short-range endemic within an anthropogenically-altered riverscape
Showing 5 of 6 shared publications
- Taxonomic Uncertainty and the Anomaly Zone: Phylogenomics Disentangle a Rapid Radiation to Resolve Contentious Species ( <i>Gila robusta</i> Complex) in the Colorado River
- The choices we make and the impacts they have: Machine learning and species delimitation in North American box turtles ( <i>Terrapene</i> spp.)
- ClineHelpR: an R package for genomic cline outlier detection and visualization
- Relictual Hybridization and Biogeography of Massasauga Rattlesnakes ( <i>Sistrurus</i> spp.)
- Historic and contemporary selection define conservation units for a short-range endemic within an anthropogenically-altered riverscape
Showing 5 of 6 shared publications
- The choices we make and the impacts they have: Machine learning and species delimitation in North American box turtles ( <i>Terrapene</i> spp.)
- Relictual Hybridization and Biogeography of Massasauga Rattlesnakes ( <i>Sistrurus</i> spp.)
- The choices we make and the impacts they have: Machine learning and species delimitation in North American box turtles ( <i>Terrapene</i> spp.)
- The choices we make and the impacts they have: Machine learning and species delimitation in North American box turtles ( <i>Terrapene</i> spp.)
- Taxonomic Uncertainty and the Anomaly Zone: Phylogenomics Disentangle a Rapid Radiation to Resolve Contentious Species ( <i>Gila robusta</i> Complex) in the Colorado River
- Taxonomic Uncertainty and the Anomaly Zone: Phylogenomics Disentangle a Rapid Radiation to Resolve Contentious Species ( <i>Gila robusta</i> Complex) in the Colorado River
- Relictual Hybridization and Biogeography of Massasauga Rattlesnakes ( <i>Sistrurus</i> spp.)
- Relictual Hybridization and Biogeography of Massasauga Rattlesnakes ( <i>Sistrurus</i> spp.)
- Historic and contemporary selection define conservation units for a short-range endemic within an anthropogenically-altered riverscape
- Historic and contemporary selection define conservation units for a short-range endemic within an anthropogenically-altered riverscape
- Historic and contemporary selection define conservation units for a short-range endemic within an anthropogenically-altered riverscape
- Historic and contemporary selection define conservation units for a short-range endemic within an anthropogenically-altered riverscape
- GeoGenIE: a deep learning approach to predict geographic provenance of biodiversity samples from genomic SNPs
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