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Biography and Research Information
OverviewAI-generated summary
Sakda Khoomrung's research centers on the application of advanced analytical techniques, including gas chromatography-mass spectrometry (GC-MS) and ultra-performance liquid chromatography-electrospray ionization-tandem mass spectrometry (UPLC-ESI-MRM/MS), for metabolomics studies. His work investigates metabolic profiles in various contexts, such as identifying urinary biomarkers for conditions like lupus membranous nephritis and analyzing plasma sugars and sugar alcohols in diabetic mellitus patients with kidney failure. Khoomrung also explores the potential of natural compounds, such as procyanidin condensed tannins from Mitragyna speciosa, as virucidal agents against SARS-CoV-2.
Further contributions include the development and application of computational methods, specifically deep learning, to analyze multi-data type information for predictive biomarker discovery in cancer precision medicine. He has also published on chloroplast genomic annotation and has experience with data processing solutions for metabolomics, demonstrated by his work with Metabox 2.0. Khoomrung collaborates with researchers at the University of Arkansas for Medical Sciences, including Alongkorn Kurilung, Intawat Nookaew, Thidathip Wongsurawat, and Piroon Jenjaroenpun.
His scholarly output includes 75 publications and 2,171 citations, with an h-index of 23, designating him as a highly cited researcher. Khoomrung maintains an active lab website to showcase his research activities.
Metrics
- h-index: 23
- Publications: 75
- Citations: 2,171
Selected Publications
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LC-QTOF-MSE with MS1-based precursor ion quantification and SiMD-assisted identification enhances human urine metabolite analysis (2025)
Collaboration Network
Top Collaborators
Yongyut Sirivatanauksorn
Netherlands Metabolomics Centre (NL)
24 shared publications
- Revisiting chloroplast genomic landscape and annotation towards comparative chloroplast genomes of Rhamnaceae
- Predicting lupus membranous nephritis using reduced picolinic acid to tryptophan ratio as a urinary biomarker
- Discovery of procyanidin condensed tannins of (−)-epicatechin from Kratom, Mitragyna speciosa, as virucidal agents against SARS-CoV-2
- GC × GC-TOFMS metabolomics analysis identifies elevated levels of plasma sugars and sugar alcohols in diabetic mellitus patients with kidney failure
- UPLC-ESI-MRM/MS for Absolute Quantification and MS/MS Structural Elucidation of Six Specialized Pyranonaphthoquinone Metabolites From Ventilago harmandiana
Showing 5 of 24 shared publications
Kwanjeera Wanichthanarak
Mahidol University (TH)
19 shared publications
- Revisiting chloroplast genomic landscape and annotation towards comparative chloroplast genomes of Rhamnaceae
- Predicting lupus membranous nephritis using reduced picolinic acid to tryptophan ratio as a urinary biomarker
- GC × GC-TOFMS metabolomics analysis identifies elevated levels of plasma sugars and sugar alcohols in diabetic mellitus patients with kidney failure
- Data processing solutions to render metabolomics more quantitative: case studies in food and clinical metabolomics using Metabox 2.0
- CRISP: a deep learning architecture for GC × GC–TOFMS contour ROI identification, simulation and analysis in imaging metabolomics
Showing 5 of 19 shared publications
Narumol Jariyasopit
Netherlands Metabolomics Centre (NL)
17 shared publications
- Predicting lupus membranous nephritis using reduced picolinic acid to tryptophan ratio as a urinary biomarker
- Mass spectrometry-based analysis of gut microbial metabolites of aromatic amino acids
- Discovery of procyanidin condensed tannins of (−)-epicatechin from Kratom, Mitragyna speciosa, as virucidal agents against SARS-CoV-2
- GC × GC-TOFMS metabolomics analysis identifies elevated levels of plasma sugars and sugar alcohols in diabetic mellitus patients with kidney failure
- UPLC-ESI-MRM/MS for Absolute Quantification and MS/MS Structural Elucidation of Six Specialized Pyranonaphthoquinone Metabolites From Ventilago harmandiana
Showing 5 of 17 shared publications
Suphitcha Limjiasahapong
Siriraj Hospital (TH)
12 shared publications
- Predicting lupus membranous nephritis using reduced picolinic acid to tryptophan ratio as a urinary biomarker
- Discovery of procyanidin condensed tannins of (−)-epicatechin from Kratom, Mitragyna speciosa, as virucidal agents against SARS-CoV-2
- UPLC-ESI-MRM/MS for Absolute Quantification and MS/MS Structural Elucidation of Six Specialized Pyranonaphthoquinone Metabolites From Ventilago harmandiana
- Traveling Wave Ion Mobility-Derived Collision Cross Section Database for Plant Specialized Metabolites: An Application to <i>Ventilago harmandiana</i> Pierre
- Quantifying fecal and plasma short-chain fatty acids in healthy Thai individuals
Showing 5 of 12 shared publications
Wonnop Visessanguan
National Centre for Genetic Resources and Biotechnology (NG)
11 shared publications
- Revisiting chloroplast genomic landscape and annotation towards comparative chloroplast genomes of Rhamnaceae
- Predicting lupus membranous nephritis using reduced picolinic acid to tryptophan ratio as a urinary biomarker
- High-Resolution QTOF-MRM for Highly Accurate Identification and Quantification of Trace Levels of Triterpenoids in <i>Ganoderma lucidum</i> Mycelium
- Accurate Prediction of Ion Mobility Collision Cross-Section Using Ion’s Polarizability and Molecular Mass with Limited Data
- Corrigendum to “Quantitative analysis of nutrient metabolite compositions of retail cow’s milk and milk alternatives in Thailand using GC–MS” [J. Food Compos. Anal. 97 (2021) 103785]
Showing 5 of 11 shared publications
Patcha Poungsombat
Siriraj Hospital (TH)
11 shared publications
- Predicting lupus membranous nephritis using reduced picolinic acid to tryptophan ratio as a urinary biomarker
- Prolonged Egg Supplement Advances Growing Child’s Growth and Gut Microbiota
- Quantifying fecal and plasma short-chain fatty acids in healthy Thai individuals
- Volatile and non‐volatile compound profiles of commercial sweet pickled mango and its correlation with consumer preference
- Metabolic profiles alteration of Southern Thailand traditional sweet pickled mango during the production process
Showing 5 of 11 shared publications
Chutima Kuhakarn
Mahidol University (TH)
9 shared publications
- Revisiting chloroplast genomic landscape and annotation towards comparative chloroplast genomes of Rhamnaceae
- Predicting lupus membranous nephritis using reduced picolinic acid to tryptophan ratio as a urinary biomarker
- UPLC-ESI-MRM/MS for Absolute Quantification and MS/MS Structural Elucidation of Six Specialized Pyranonaphthoquinone Metabolites From Ventilago harmandiana
- Traveling Wave Ion Mobility-Derived Collision Cross Section Database for Plant Specialized Metabolites: An Application to <i>Ventilago harmandiana</i> Pierre
- Additional file 4 of Revisiting chloroplast genomic landscape and annotation towards comparative chloroplast genomes of Rhamnaceae
Showing 5 of 9 shared publications
Vichai Reutrakul
Mahidol University (TH)
9 shared publications
- Revisiting chloroplast genomic landscape and annotation towards comparative chloroplast genomes of Rhamnaceae
- Predicting lupus membranous nephritis using reduced picolinic acid to tryptophan ratio as a urinary biomarker
- UPLC-ESI-MRM/MS for Absolute Quantification and MS/MS Structural Elucidation of Six Specialized Pyranonaphthoquinone Metabolites From Ventilago harmandiana
- Traveling Wave Ion Mobility-Derived Collision Cross Section Database for Plant Specialized Metabolites: An Application to <i>Ventilago harmandiana</i> Pierre
- Additional file 4 of Revisiting chloroplast genomic landscape and annotation towards comparative chloroplast genomes of Rhamnaceae
Showing 5 of 9 shared publications
Atikorn Panya
National Center for Genetic Engineering and Biotechnology (TH)
9 shared publications
- Predicting lupus membranous nephritis using reduced picolinic acid to tryptophan ratio as a urinary biomarker
- Volatile and non‐volatile compound profiles of commercial sweet pickled mango and its correlation with consumer preference
- Metabolic profiles alteration of Southern Thailand traditional sweet pickled mango during the production process
- Corrigendum to “Quantitative analysis of nutrient metabolite compositions of retail cow’s milk and milk alternatives in Thailand using GC–MS” [J. Food Compos. Anal. 97 (2021) 103785]
- Author response for "Volatile and non‐volatile compound profiles of commercial sweet pickled mango and its correlation with consumer preference"
Showing 5 of 9 shared publications
Narong Nuntasaen
Mahidol University (TH)
8 shared publications
- Revisiting chloroplast genomic landscape and annotation towards comparative chloroplast genomes of Rhamnaceae
- UPLC-ESI-MRM/MS for Absolute Quantification and MS/MS Structural Elucidation of Six Specialized Pyranonaphthoquinone Metabolites From Ventilago harmandiana
- Traveling Wave Ion Mobility-Derived Collision Cross Section Database for Plant Specialized Metabolites: An Application to <i>Ventilago harmandiana</i> Pierre
- Additional file 4 of Revisiting chloroplast genomic landscape and annotation towards comparative chloroplast genomes of Rhamnaceae
- Additional file 6 of Revisiting chloroplast genomic landscape and annotation towards comparative chloroplast genomes of Rhamnaceae
Showing 5 of 8 shared publications
Intawat Nookaew
Siriraj Hospital
8 shared publications
In database
- Revisiting chloroplast genomic landscape and annotation towards comparative chloroplast genomes of Rhamnaceae
- UPLC-ESI-MRM/MS for Absolute Quantification and MS/MS Structural Elucidation of Six Specialized Pyranonaphthoquinone Metabolites From Ventilago harmandiana
- Additional file 4 of Revisiting chloroplast genomic landscape and annotation towards comparative chloroplast genomes of Rhamnaceae
- Additional file 6 of Revisiting chloroplast genomic landscape and annotation towards comparative chloroplast genomes of Rhamnaceae
- Additional file 3 of Revisiting chloroplast genomic landscape and annotation towards comparative chloroplast genomes of Rhamnaceae
Showing 5 of 8 shared publications
Alongkorn Kurilung
Siriraj Hospital
8 shared publications
In database
- Traveling Wave Ion Mobility-Derived Collision Cross Section Database for Plant Specialized Metabolites: An Application to <i>Ventilago harmandiana</i> Pierre
- Quantifying fecal and plasma short-chain fatty acids in healthy Thai individuals
- High-Resolution QTOF-MRM for Highly Accurate Identification and Quantification of Trace Levels of Triterpenoids in <i>Ganoderma lucidum</i> Mycelium
- Measurement of very low-molecular weight metabolites by traveling wave ion mobility and its use in human urine samples
- Accurate Prediction of Ion Mobility Collision Cross-Section Using Ion’s Polarizability and Molecular Mass with Limited Data
Showing 5 of 8 shared publications
Pattipong Wisanpitayakorn
Kidney Disease Association of Thailand (TH)
8 shared publications
- GC × GC-TOFMS metabolomics analysis identifies elevated levels of plasma sugars and sugar alcohols in diabetic mellitus patients with kidney failure
- Traveling Wave Ion Mobility-Derived Collision Cross Section Database for Plant Specialized Metabolites: An Application to <i>Ventilago harmandiana</i> Pierre
- Measurement of very low-molecular weight metabolites by traveling wave ion mobility and its use in human urine samples
- Accurate Prediction of Ion Mobility Collision Cross-Section Using Ion’s Polarizability and Molecular Mass with Limited Data
- Multi-Pass Arrival Time Correction in Cyclic Ion Mobility Mass Spectrometry for Imaging and Shotgun Lipidomics
Showing 5 of 8 shared publications
Natthaporn Phonsatta
National Center for Genetic Engineering and Biotechnology (TH)
7 shared publications
- Predicting lupus membranous nephritis using reduced picolinic acid to tryptophan ratio as a urinary biomarker
- Volatile and non‐volatile compound profiles of commercial sweet pickled mango and its correlation with consumer preference
- Metabolic profiles alteration of Southern Thailand traditional sweet pickled mango during the production process
- Author response for "Volatile and non‐volatile compound profiles of commercial sweet pickled mango and its correlation with consumer preference"
- Shotgun Sequencing of Southern Thailand Traditional Sweet Pickled Mango During the Production Process
Showing 5 of 7 shared publications
Nuankanya Sathirapongsasuti
National Nanotechnology Center (TH)
7 shared publications
- Predicting lupus membranous nephritis using reduced picolinic acid to tryptophan ratio as a urinary biomarker
- GC × GC-TOFMS metabolomics analysis identifies elevated levels of plasma sugars and sugar alcohols in diabetic mellitus patients with kidney failure
- CRISP: a deep learning architecture for GC × GC–TOFMS contour ROI identification, simulation and analysis in imaging metabolomics
- Measurement of very low-molecular weight metabolites by traveling wave ion mobility and its use in human urine samples
- Accurate Prediction of Ion Mobility Collision Cross-Section Using Ion’s Polarizability and Molecular Mass with Limited Data
Showing 5 of 7 shared publications
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