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Institution-verified
Presence
Current · Arkansas
Last published
2026
Sources
Institutional record
Refreshed
2026-10-05
I
Intawat Nookaew
Sourced from institutional research profiles (UAMS TRI or ARA).
High Impact
Professor
Also affiliated: Kunming University of Science and Technology (2018); Oak Ridge National Laboratory (2014–2021); Pennsylvania State University (2012); Siriraj Hospital (2017–2026); Mahidol University (2017–2026); University of Arkansas Medical Center (2020–2026); Novo Nordisk Foundation (2012); Molecular Microbiology and Genomics Consultants (Germany) (2017–2018); King Mongkut's University of Technology Thonburi (2007–2013); Chalmers University of Technology (2010–2020); University of Gothenburg (2013); Technical University of Denmark (2010–2013)
Biomedical Informatics, College of Medicine
58 h-index
350 pubs
18,842 cited
Research Areas
Biomedical Subjects
Biography and Research Information
OverviewAI-generated summary
Intawat Nookaew's research focuses on the application of biomedical informatics and computational approaches to understand complex biological systems, particularly in the context of metabolism and the microbiome. His work has contributed to the reconstruction of genome-scale metabolic networks for human cell types and cancer, aiding in the understanding of disease mechanisms. He has investigated the role of the gut microbiome in conditions such as glucose control and atherosclerosis, and has explored the metabolic underpinnings of various biological processes.
Nookaew's publications also demonstrate an interest in advancing computational biology methodologies, including techniques for gene set analysis and the standardization of metabolic model testing. His research group at the University of Arkansas for Medical Sciences collaborates with other researchers, including Thidathip Wongsurawat and Piroon Jenjaroenpun, on projects related to these areas. With a substantial publication record, high citation count, and an h-index of 57, Nookaew is recognized as a highly cited researcher.
Metrics
- h-index: 58
- Publications: 350
- Citations: 18,842
Positions
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Pro 2024–presentUniversity of Arkansas for Medical Sciences Biomedical Informatics ORCID
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Professor publications 2016–2026University of Arkansas for Medical Sciences Biomedical Informatics, College of Medicine Institutional directory
Selected Publications
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The Aging Landscape by scRNAseq of Mesenchymal Lineage Cells in Mouse Bone (2025)
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Healing of lytic lesions and restoration of bone health in multiple myeloma through sclerostin inhibition (2025)
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Mechanisms of mitochondrial reactive oxygen species action in bone mesenchymal cells (2025)
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Elevation of master autophagy regulator Tfeb in osteoblast lineage cells increases bone mass and strength (2025)
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LC-QTOF-MS E with MS 1 -based precursor ion quantification and SiMD-assisted identification enhances human urine metabolite analysis (2025)
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Oat bran fiber protects against radiation-induced disruption of gut barrier dynamics and mucosal damage (2025)
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The DigH glycosyl hydrolase is conditionally required for daughter cell separation in Escherichia coli (2025)
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Intrinsic p53 activation restricts gammaherpesvirus driven germinal center B cell expansion during latency establishment (2025)
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A Randomized Double-Blind Phase 2 Clinical Trial Treating Cervical Intraepithelial Neoplasia 2/3 with PepCan or Candida (2025)
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Investigating the origins of the mutational signatures in cancer (2025)
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Single-Cell Transcriptomic Analysis Identifies Senescent Osteocytes That Trigger Bone Destruction in Breast Cancer Metastasis (2024)
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CAIM: coverage-based analysis for identification of microbiome (2024)
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Sensitivity and specificity of Nanopore sequencing for detecting carbapenem and 3rd-generation cephalosporin-resistant Enterobacteriaceae in urine samples: Real-time simulation with public antimicrobial resistance gene database (2024)
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Single-cell Transcriptome Analysis Identifies Senescent Osteocytes as Contributors to Bone Destruction in Breast Cancer Metastasis (2024)
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Refining the identity of mesenchymal cell types associated with murine periosteal and endosteal bone (2024)
Collaboration Network
Top Collaborators
Thidathip Wongsurawat
Siriraj Hospital
45 shared publications
In database
- Decoding the epitranscriptional landscape from native RNA sequences
- Complete genomic and transcriptional landscape analysis using third-generation sequencing: a case study of Saccharomyces cerevisiae CEN.PK113-7D
- PARP1 Is Up-Regulated in Non-small Cell Lung Cancer Tissues in the Presence of the Cyanobacterial Toxin Microcystin
- Safety Assessment of a Nham Starter Culture Lactobacillus plantarum BCC9546 via Whole-genome Analysis
- A chromosome‐level assembly of the black tiger shrimp ( Penaeus monodon ) genome facilitates the identification of growth‐associated genes
Showing 5 of 45 shared publications
Piroon Jenjaroenpun
Siriraj Hospital
45 shared publications
In database
- Decoding the epitranscriptional landscape from native RNA sequences
- Complete genomic and transcriptional landscape analysis using third-generation sequencing: a case study of Saccharomyces cerevisiae CEN.PK113-7D
- PARP1 Is Up-Regulated in Non-small Cell Lung Cancer Tissues in the Presence of the Cyanobacterial Toxin Microcystin
- Safety Assessment of a Nham Starter Culture Lactobacillus plantarum BCC9546 via Whole-genome Analysis
- A chromosome‐level assembly of the black tiger shrimp ( Penaeus monodon ) genome facilitates the identification of growth‐associated genes
Showing 5 of 45 shared publications
David W. Ussery
University of Arkansas for Medical Sciences
29 shared publications
In database
- Decoding the epitranscriptional landscape from native RNA sequences
- Complete genomic and transcriptional landscape analysis using third-generation sequencing: a case study of Saccharomyces cerevisiae CEN.PK113-7D
- PARP1 Is Up-Regulated in Non-small Cell Lung Cancer Tissues in the Presence of the Cyanobacterial Toxin Microcystin
- Case of Microcephaly after Congenital Infection with Asian Lineage Zika Virus, Thailand
- Viral Phylogenomics Using an Alignment-Free Method: A Three-Step Approach to Determine Optimal Length of k-mer
Showing 5 of 29 shared publications
Visanu Wanchai
Institute for Musculoskeletal Health
14 shared publications
In database
- Decoding the epitranscriptional landscape from native RNA sequences
- CReSIL: accurate identification of extrachromosomal circular DNA from long-read sequences
- Refining the identity of mesenchymal cell types associated with murine periosteal and endosteal bone
- Suggested mechanisms for Zika virus causing microcephaly: what do the genomes tell us?
- Native RNA or cDNA Sequencing for Transcriptomic Analysis: A Case Study on Saccharomyces cerevisiae
Showing 5 of 14 shared publications
Se‐Ran Jun
University of Arkansas for Medical Sciences
13 shared publications
In database
- Abiotic Stresses Shift Belowground Populus -Associated Bacteria Toward a Core Stress Microbiome
- Case of Microcephaly after Congenital Infection with Asian Lineage Zika Virus, Thailand
- Viral Phylogenomics Using an Alignment-Free Method: A Three-Step Approach to Determine Optimal Length of k-mer
- Sample storage conditions induce post-collection biases in microbiome profiles
- KITSUNE: A Tool for Identifying Empirically Optimal K-mer Length for Alignment-Free Phylogenomic Analysis
Showing 5 of 13 shared publications
Maria Almeida
University of Arkansas for Medical Sciences
11 shared publications
In database
- Stimulation of Piezo1 by mechanical signals promotes bone anabolism
- Estrogens decrease osteoclast number by attenuating mitochondria oxidative phosphorylation and ATP production in early osteoclast precursors
- Refining the identity of mesenchymal cell types associated with murine periosteal and endosteal bone
- Neutralization of oxidized phospholipids attenuates age‐associated bone loss in mice
- Single-Cell Transcriptomic Analysis Identifies Senescent Osteocytes That Trigger Bone Destruction in Breast Cancer Metastasis
Showing 5 of 11 shared publications
Charles A. O’Brien
University of Arkansas for Medical Sciences
9 shared publications
In database
- Reduced osteoprotegerin expression by osteocytes may contribute to rebound resorption after denosumab discontinuation
- Refining the identity of mesenchymal cell types associated with murine periosteal and endosteal bone
- Effective CRISPR interference of an endogenous gene via a single transgene in mice
- Single-Cell Transcriptomic Analysis Identifies Senescent Osteocytes That Trigger Bone Destruction in Breast Cancer Metastasis
- The NAD salvage pathway in mesenchymal cells is indispensable for skeletal development in mice
Showing 5 of 9 shared publications
Trudy M. Wassenaar
Molecular Microbiology and Genomics Consultants (Germany) (DE)
8 shared publications
- Decoding the epitranscriptional landscape from native RNA sequences
- Case of Microcephaly after Congenital Infection with Asian Lineage Zika Virus, Thailand
- Suggested mechanisms for Zika virus causing microcephaly: what do the genomes tell us?
- Decoding the Epitranscriptional Landscape from Native RNA Sequences
- Genome-Based Comparison of Clostridioides difficile: Average Amino Acid Identity Analysis of Core Genomes
Showing 5 of 8 shared publications
Nitsara Karoonuthaisiri
Queen's University Belfast (GB)
8 shared publications
- A chromosome‐level assembly of the black tiger shrimp ( Penaeus monodon ) genome facilitates the identification of growth‐associated genes
- Transcriptome analyses reveal the synergistic effects of feeding and eyestalk ablation on ovarian maturation in black tiger shrimp
- Comparative Analysis of PacBio and Oxford Nanopore Sequencing Technologies for Transcriptomic Landscape Identification of Penaeus monodon
- Optimization of high molecular weight DNA extraction methods in shrimp for a long-read sequencing platform
- Global metabolite profiles of rice brown planthopper-resistant traits reveal potential secondary metabolites for both constitutive and inducible defenses
Showing 5 of 8 shared publications
Preecha Patumcharoenpol
University of Arkansas for Medical Sciences (US)
7 shared publications
- Complete genomic and transcriptional landscape analysis using third-generation sequencing: a case study of Saccharomyces cerevisiae CEN.PK113-7D
- PARP1 Is Up-Regulated in Non-small Cell Lung Cancer Tissues in the Presence of the Cyanobacterial Toxin Microcystin
- KITSUNE: A Tool for Identifying Empirically Optimal K-mer Length for Alignment-Free Phylogenomic Analysis
- Suggested mechanisms for Zika virus causing microcephaly: what do the genomes tell us?
- Genomic characterization of mumps viruses from a large-scale mumps outbreak in Arkansas, 2016
Showing 5 of 7 shared publications
Gunnar Boysen
Winthrop Rockefeller Foundation
7 shared publications
In database
- Decoding the epitranscriptional landscape from native RNA sequences
- PARP1 Is Up-Regulated in Non-small Cell Lung Cancer Tissues in the Presence of the Cyanobacterial Toxin Microcystin
- Detection and Discrimination of DNA Adducts Differing in Size, Regiochemistry, and Functional Group by Nanopore Sequencing
- Investigating the origins of the mutational signatures in cancer
- Current and Future Methodology for Quantitation and Site-Specific Mapping the Location of DNA Adducts
Showing 5 of 7 shared publications
Ha‐Neui Kim
University of Arkansas for Medical Sciences
7 shared publications
In database
- Estrogens decrease osteoclast number by attenuating mitochondria oxidative phosphorylation and ATP production in early osteoclast precursors
- Refining the identity of mesenchymal cell types associated with murine periosteal and endosteal bone
- Piezo1 stimulates mitochondrial function via cAMP signaling
- The NAD salvage pathway in mesenchymal cells is indispensable for skeletal development in mice
- Mmp13 deletion in mesenchymal cells increases bone mass and may attenuate the cortical bone loss caused by estrogen deficiency
Showing 5 of 7 shared publications
Natthaya Chuaypen
Chulalongkorn University (TH)
7 shared publications
- Cell-Free DNA Analysis by Whole-Exome Sequencing for Hepatocellular Carcinoma: A Pilot Study in Thailand
- Transcriptomic Analyses Reveal Long Non-Coding RNA in Peripheral Blood Mononuclear Cells as a Novel Biomarker for Diagnosis and Prognosis of Hepatocellular Carcinoma
- Long-term benefit of DAAs on gut dysbiosis and microbial translocation in HCV-infected patients with and without HIV coinfection
- Improvement of Gut Diversity and Composition After Direct-Acting Antivirals in Hepatitis C Virus–Infected Patients With or Without Human Immunodeficiency Virus Coinfection
- Identification of BHLHE40 expression in peripheral blood mononuclear cells as a novel biomarker for diagnosis and prognosis of hepatocellular carcinoma
Showing 5 of 7 shared publications
Sakda Khoomrung
Siriraj Hospital
6 shared publications
In database
- Comparative Systems Analyses Reveal Molecular Signatures of Clinically tested Vaccine Adjuvants
- Metabolomics and Integrative Omics for the Development of Thai Traditional Medicine
- Revisiting chloroplast genomic landscape and annotation towards comparative chloroplast genomes of Rhamnaceae
- UPLC-ESI-MRM/MS for Absolute Quantification and MS/MS Structural Elucidation of Six Specialized Pyranonaphthoquinone Metabolites From Ventilago harmandiana
- Metabolic Profiling and Compound-Class Identification Reveal Alterations in Serum Triglyceride Levels in Mice Immunized with Human Vaccine Adjuvant Alum
Showing 5 of 6 shared publications
Michael S. Robeson
University of Arkansas for Medical Sciences
6 shared publications
In database
- Genomic characterization of mumps viruses from a large-scale mumps outbreak in Arkansas, 2016
- 16S rRNA Gene Amplicon Profiling of Baby and Adult Captive Elephants in Thailand
- Short‐Term Ingestion of Essential Amino Acid Based Nutritional Supplements or Whey Protein Improves the Physical Function of Older Adults Independently of Gut Microbiome
- Oat bran fiber protects against radiation-induced disruption of gut barrier dynamics and mucosal damage
- A Randomized Double-Blind Phase 2 Clinical Trial Treating Cervical Intraepithelial Neoplasia 2/3 with PepCan or Candida
Showing 5 of 6 shared publications
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