Andrew James Alverson
Affiliation confirmed via AI analysis of OpenAlex, ORCID, and web sources.
Professor
Also affiliated: Iowa State University (2001–2002); Indiana University Bloomington (2008–2013); Indiana University (2008–2013); The University of Texas at Austin (2003–2007)
Research Areas
Biomedical Subjects
Biography and Research Information
OverviewAI-generated summary
Andrew James Alverson, a Professor at the University of Arkansas at Fayetteville, conducts research focused on the evolution of plant genomes, particularly mitochondrial genomes. His work investigates the mechanisms behind genome size expansion, the high mutation rates observed in some plant mitochondria, and the implications of horizontal gene transfer. Alverson has published extensively on these topics, including studies on the "fossilized" mitochondrial genome of *Liriodendron tulipifera* and the origins of multichromosomal mitochondrial genomes in plants like cucumber.
His research also extends to chloroplast genomics and phylogenetic analyses. Alverson has developed and applied methods for obtaining and analyzing whole chloroplast genome sequences to resolve plant relationships, as demonstrated in his work on *Vitis* (Vitaceae). He has received significant federal funding from the National Science Foundation (NSF) for collaborative research on the phylogeny, systematics, and adaptation of marine epizoic diatoms.
Alverson's scholarly contributions are recognized by a high-impact researcher designation, evidenced by his h-index of 37 and over 7,000 citations. He maintains an active research group and collaborates closely with colleagues at the University of Arkansas at Fayetteville, including Eveline Pinseel, Wade R. Roberts, Elizabeth C. Ruck, and Kala M. Downey.
Metrics
- h-index: 37
- Publications: 126
- Citations: 7,448
Positions
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Professor 2023–presentUniversity of Arkansas Department of Biological Sciences ORCID
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Associate Professor 2018–2023University of Arkansas Biological Sciences ORCID
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Assistant Professor 2012–2018University of Arkansas Biological Sciences ORCID
Selected Publications
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The 100 Diatom Genomes Project (2026)
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Gene loss under constant cold reveals “natural knockout” loci in Antarctic notothenioid fishes (2026)
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Disentangled Assembly Graphs Reveal Hidden Eukaryotic Diversity in <scp>eDNA</scp> Metagenomic Data (2026)
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Phylogenetic classification of diatoms (2026)
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Phylogenetic classification of diatoms (2026)
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A phylogenetic classification of diatoms (Bacillariophyta) (2026)
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Reference genome for the benthic marine diatom <i>Psammoneis japonica</i> : Bacterial associations and repeat‐driven genome size evolution in diatoms (2025)
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Disentangled assembly graphs reveal hidden eukaryotic diversity in metagenomic data (2025)
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Genome‐Wide Adaptation to a Complex Environmental Gradient in a Keystone Phytoplankton Species (2025)
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Phylogenomics reveals the slow-burning fuse of diatom evolution (2025)
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Three reference genomes for freshwater diatom ecology and evolution (2025)
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The Divergent Responses of Salinity Generalists to Hyposaline Stress Provide Insights Into the Colonisation of Freshwaters by Diatoms (2024)
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The Cretaceous Diatom Database: A tool for investigating early diatom evolution (2024)
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Diatom abundance in the polar oceans is predicted by genome size (2024)
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The divergent responses of salinity generalists to hyposaline stress provide insights into the colonization of freshwaters by diatoms (2024)
Federal Grants 1 $918,053 total
Collaboration Network
Top Collaborators
- Phylogeny, ecology, morphological evolution, and reclassification of the diatom orders Surirellales and Rhopalodiales
- Serial Gene Losses and Foreign DNA Underlie Size and Sequence Variation in the Plastid Genomes of Diatoms
- Phylogenomics reveals an extensive history of genome duplication in diatoms (Bacillariophyta)
- Strain-specific transcriptional responses overshadow salinity effects in a marine diatom sampled along the Baltic Sea salinity cline
- Improved Reference Genome for <i>Cyclotella cryptica</i> CCMP332, a Model for Cell Wall Morphogenesis, Salinity Adaptation, and Lipid Production in Diatoms (Bacillariophyta)
Showing 5 of 36 shared publications
- Accelerated diversification is related to life history and locomotion in a hyperdiverse lineage of microbial eukaryotes (Diatoms, Bacillariophyta)
- Diatoms diversify and turn over faster in freshwater than marine environments*
- Phylogeny, ecology, morphological evolution, and reclassification of the diatom orders Surirellales and Rhopalodiales
- Serial Gene Losses and Foreign DNA Underlie Size and Sequence Variation in the Plastid Genomes of Diatoms
- Phylogenomics reveals an extensive history of genome duplication in diatoms (Bacillariophyta)
Showing 5 of 31 shared publications
- Improved Reference Genome for <i>Cyclotella cryptica</i> CCMP332, a Model for Cell Wall Morphogenesis, Salinity Adaptation, and Lipid Production in Diatoms (Bacillariophyta)
- The genome of a nonphotosynthetic diatom provides insights into the metabolic shift to heterotrophy and constraints on the loss of photosynthesis
- Resolving Marine–Freshwater Transitions by Diatoms Through a Fog of Gene Tree Discordance
- Diatom abundance in the polar oceans is predicted by genome size
- Phylotranscriptomics reveals the reticulate evolutionary history of a widespread diatom species complex
Showing 5 of 23 shared publications
- Strain-specific transcriptional responses overshadow salinity effects in a marine diatom sampled along the Baltic Sea salinity cline
- The dynamic response to hypo‐osmotic stress reveals distinct stages of freshwater acclimation by a euryhaline diatom
- Resolving Marine–Freshwater Transitions by Diatoms Through a Fog of Gene Tree Discordance
- Phylogenomics reveals the slow-burning fuse of diatom evolution
- Local adaptation of a marine diatom is governed by genome-wide changes in diverse metabolic processes
Showing 5 of 20 shared publications
- Strain-specific transcriptional responses overshadow salinity effects in a marine diatom sampled along the Baltic Sea salinity cline
- Improved Reference Genome for <i>Cyclotella cryptica</i> CCMP332, a Model for Cell Wall Morphogenesis, Salinity Adaptation, and Lipid Production in Diatoms (Bacillariophyta)
- Transcriptional Response of Osmolyte Synthetic Pathways and Membrane Transporters in a Euryhaline Diatom During Long‐term Acclimation to a Salinity Gradient
- The dynamic response to hypo‐osmotic stress reveals distinct stages of freshwater acclimation by a euryhaline diatom
- Resolving Marine–Freshwater Transitions by Diatoms Through a Fog of Gene Tree Discordance
Showing 5 of 19 shared publications
- Phylogeny, ecology, morphological evolution, and reclassification of the diatom orders Surirellales and Rhopalodiales
- Serial Gene Losses and Foreign DNA Underlie Size and Sequence Variation in the Plastid Genomes of Diatoms
- Towards a phylogenetic classification of species belonging to the diatom genus Cyclotella (Bacillariophyceae): Transfer of species formerly placed in Puncticulata, Handmannia, Pliocaenicus and Cyclotella to the genus Lindavia
- Next-generation phenomics for the Tree of Life
- Using phylogeny to model cell size evolution in marine and freshwater diatoms
Showing 5 of 11 shared publications
- Strain-specific transcriptional responses overshadow salinity effects in a marine diatom sampled along the Baltic Sea salinity cline
- Transcriptional Response of Osmolyte Synthetic Pathways and Membrane Transporters in a Euryhaline Diatom During Long‐term Acclimation to a Salinity Gradient
- The dynamic response to hypo‐osmotic stress reveals distinct stages of freshwater acclimation by a euryhaline diatom
- The Divergent Responses of Salinity Generalists to Hyposaline Stress Provide Insights Into the Colonisation of Freshwaters by Diatoms
- Strain-specific transcriptional responses overshadow salinity effects in a marine diatom sampled along the Baltic Sea salinity cline
Showing 5 of 10 shared publications
- Phylogenomics reveals an extensive history of genome duplication in diatoms (Bacillariophyta)
- Signal, Uncertainty, and Conflict in Phylogenomic Data for a Diverse Lineage of Microbial Eukaryotes (Diatoms, Bacillariophyta)
- Recurrent Loss, Horizontal Transfer, and the Obscure Origins of Mitochondrial Introns in Diatoms (Bacillariophyta)
- Transcriptomic Insights into the Life History of Bolidophytes, the Sister Lineage to Diatoms
- Phylogenomics reveals the slow-burning fuse of diatom evolution
Showing 5 of 9 shared publications
- Recurrent Loss, Horizontal Transfer, and the Obscure Origins of Mitochondrial Introns in Diatoms (Bacillariophyta)
- The genome of a nonphotosynthetic diatom provides insights into the metabolic shift to heterotrophy and constraints on the loss of photosynthesis
- A single loss of photosynthesis in the diatom order Bacillariales (Bacillariophyta)
- A single loss of photosynthesis in diatoms
- Supporting Data For Onyshchenko Et Al. 2018 Single Loss Of Photosynthesis In Diatoms
Showing 5 of 9 shared publications
- Uncertainties surrounding the oldest fossil record of diatoms
- Phylogenomics reveals the slow-burning fuse of diatom evolution
- The Cretaceous Diatom Database: A tool for investigating early diatom evolution
- Looking for the oldest diatoms
- Perspectives on the emergence of diatoms and their impact on the global biogeochemical cycle of silica
Showing 5 of 8 shared publications
- The genome of a nonphotosynthetic diatom provides insights into the metabolic shift to heterotrophy and constraints on the loss of photosynthesis
- The dynamic response to hypo‐osmotic stress reveals distinct stages of freshwater acclimation by a euryhaline diatom
- The Divergent Responses of Salinity Generalists to Hyposaline Stress Provide Insights Into the Colonisation of Freshwaters by Diatoms
- The dynamic response to hypoosmotic stress reveals distinct stages of freshwater acclimation by a euryhaline diatom
- The genome of a nonphotosynthetic diatom provides insights into the metabolic shift to heterotrophy and constraints on the loss of photosynthesis
Showing 5 of 7 shared publications
- Uncertainties surrounding the oldest fossil record of diatoms
- The Cretaceous Diatom Database: A tool for investigating early diatom evolution
- Looking for the oldest diatoms
- Perspectives on the emergence of diatoms and their impact on the global biogeochemical cycle of silica
- Gene Duplication, Shifting Selection, and Dosage Balance of Silicon Transporter Proteins in Marine and Freshwater Diatoms
Showing 5 of 7 shared publications
- Phylogenomics reveals an extensive history of genome duplication in diatoms (Bacillariophyta)
- Signal, Uncertainty, and Conflict in Phylogenomic Data for a Diverse Lineage of Microbial Eukaryotes (Diatoms, Bacillariophyta)
- Phylogenomics reveals the slow-burning fuse of diatom evolution
- Signal, Uncertainty, And Conflict In Phylogenomic Data For A Diverse Lineage Of Microbial Eukaryotes (Diatoms, Bacillariophyta)
- Signal, Uncertainty, And Conflict In Phylogenomic Data For A Diverse Lineage Of Microbial Eukaryotes (Diatoms, Bacillariophyta)
Showing 5 of 6 shared publications
- Strain-specific transcriptional responses overshadow salinity effects in a marine diatom sampled along the Baltic Sea salinity cline
- Local adaptation of a marine diatom is governed by genome-wide changes in diverse metabolic processes
- Genome‐Wide Adaptation to a Complex Environmental Gradient in a Keystone Phytoplankton Species
- Strain-specific transcriptional responses overshadow salinity effects in a marine diatom sampled along the Baltic Sea salinity cline
- Genotype-specific transcriptional responses overshadow salinity effects in a marine diatom sampled along the Baltic Sea salinity cline
Showing 5 of 6 shared publications
- Strain-specific transcriptional responses overshadow salinity effects in a marine diatom sampled along the Baltic Sea salinity cline
- Local adaptation of a marine diatom is governed by genome-wide changes in diverse metabolic processes
- Genome‐Wide Adaptation to a Complex Environmental Gradient in a Keystone Phytoplankton Species
- Strain-specific transcriptional responses overshadow salinity effects in a marine diatom sampled along the Baltic Sea salinity cline
- Genotype-specific transcriptional responses overshadow salinity effects in a marine diatom sampled along the Baltic Sea salinity cline
Showing 5 of 6 shared publications
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