Kaleb Z. Abram
Postdoctoral Researcher
Also affiliated: University of Applied Management Studies (2022)
Formerly Arkansas Affiliated with UAMS through 2024; recent publications list United States National Library of Medicine.
Postdoc Researcher
Research Areas
Biomedical Subjects
Links
Biography and Research Information
OverviewAI-generated summary
Kaleb Z. Abram's research focuses on the genomic analysis of microbial populations, particularly concerning antibiotic resistance and bacterial phylogeny. His work involves investigating mobile genetic elements associated with resistance genes in pathogens like Enterococcus isolates from patients with prolonged bacteremia. Abram also studies the genomic diversity of bacterial groups, including the Pseudomonas putida group, exploring their taxonomy, core pangenome, and resistance mechanisms. He has contributed to understanding the genomic epidemiology and resistance patterns of Enterococcus faecium in cancer patients. Additionally, his research has explored large-scale genomic analyses of Escherichia coli to define distinct phylogroups and has examined the core and accessory genes of Pseudomonas aeruginosa as an opportunistic pathogen. Abram also has an interest in novel data storage methods, specifically using DNA as a storage medium. His scholarly metrics include an h-index of 7 with 19 publications and 235 citations.
Metrics
- h-index: 7
- Publications: 19
- Citations: 238
Selected Publications
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Unraveling the genomic diversity of the <i>Pseudomonas putida</i> group: exploring taxonomy, core pangenome, and antibiotic resistance mechanisms (2024)
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Leveraging nature to advance data storage: <scp>DNA</scp> as a storage medium (2023)
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Top-Down Genomic Surveillance Approach To Investigate the Genomic Epidemiology and Antibiotic Resistance Patterns of Enterococcus faecium Detected in Cancer Patients in Arkansas (2023)
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Genomic Distance-based Rapid Uncovering of Microbial Population Structures (GRUMPS): a reference free genomic data cleaning methodology (2022)
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Top-Down Genomic Surveillance Approach to Investigate the Genomic Epidemiology and Antibiotic Resistance Patterns of <i>Enterococcus faecium</i> Detected in Cancer Patients in Arkansas (2022)
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Pseudomonas aeruginosa Pangenome: Core and Accessory Genes of a Highly Resourceful Opportunistic Pathogen (2022)
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Insertion sequences and other mobile elements associated with antibiotic resistance genes in Enterococcus isolates from an inpatient with prolonged bacteraemia (2022)
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Complete Genome Sequence of a Non-Carbapenemase-Producing Carbapenem-Resistant Providencia rettgeri Strain Isolated from a Clinical Urine Sample in Arkansas (2022)
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Isolation of AmpC- and extended spectrum β-lactamase-producing Enterobacterales from fresh vegetables in the United States (2021)
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Insertion sequences associated with antibiotic resistance genes in <i>Enterococcus</i> isolates from an inpatient with prolonged bacteremia (2021)
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Mash-based analyses of Escherichia coli genomes reveal 14 distinct phylogroups (2021)
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Mash-based analyses of E. coli genomes reveal 14 distinct phylogroups (2020)
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Mash-based analyses of E. coli genomes reveal 14 distinct phylogroups (2020)
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What can we learn from over 100,000 <i>Escherichia coli</i> genomes? (2019)
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Towards a better metabolic engineering reference: the microbial <i>chassis</i> (2018)
Collaboration Network
Top Collaborators
- Mash-based analyses of Escherichia coli genomes reveal 14 distinct phylogroups
- Isolation of AmpC- and extended spectrum β-lactamase-producing Enterobacterales from fresh vegetables in the United States
- Insertion sequences and other mobile elements associated with antibiotic resistance genes in Enterococcus isolates from an inpatient with prolonged bacteraemia
- Pseudomonas aeruginosa Pangenome: Core and Accessory Genes of a Highly Resourceful Opportunistic Pathogen
- Unraveling the genomic diversity of the <i>Pseudomonas putida</i> group: exploring taxonomy, core pangenome, and antibiotic resistance mechanisms
Showing 5 of 11 shared publications
- Isolation of AmpC- and extended spectrum β-lactamase-producing Enterobacterales from fresh vegetables in the United States
- Insertion sequences and other mobile elements associated with antibiotic resistance genes in Enterococcus isolates from an inpatient with prolonged bacteraemia
- Pseudomonas aeruginosa Pangenome: Core and Accessory Genes of a Highly Resourceful Opportunistic Pathogen
- Top-Down Genomic Surveillance Approach To Investigate the Genomic Epidemiology and Antibiotic Resistance Patterns of Enterococcus faecium Detected in Cancer Patients in Arkansas
- Genomic Distance-based Rapid Uncovering of Microbial Population Structures (GRUMPS): a reference free genomic data cleaning methodology
Showing 5 of 8 shared publications
- Insertion sequences and other mobile elements associated with antibiotic resistance genes in Enterococcus isolates from an inpatient with prolonged bacteraemia
- Top-Down Genomic Surveillance Approach To Investigate the Genomic Epidemiology and Antibiotic Resistance Patterns of Enterococcus faecium Detected in Cancer Patients in Arkansas
- Complete Genome Sequence of a Non-Carbapenemase-Producing Carbapenem-Resistant Providencia rettgeri Strain Isolated from a Clinical Urine Sample in Arkansas
- Insertion sequences associated with antibiotic resistance genes in <i>Enterococcus</i> isolates from an inpatient with prolonged bacteremia
- Top-Down Genomic Surveillance Approach to Investigate the Genomic Epidemiology and Antibiotic Resistance Patterns of <i>Enterococcus faecium</i> Detected in Cancer Patients in Arkansas
- Mash-based analyses of Escherichia coli genomes reveal 14 distinct phylogroups
- Genomic Distance-based Rapid Uncovering of Microbial Population Structures (GRUMPS): a reference free genomic data cleaning methodology
- Isolation of AmpC- and extended spectrum β-lactamase-producing Enterobacterales from fresh vegetables in the United States
- Complete Genome Sequence of a Non-Carbapenemase-Producing Carbapenem-Resistant Providencia rettgeri Strain Isolated from a Clinical Urine Sample in Arkansas
- Mash-based analyses of Escherichia coli genomes reveal 14 distinct phylogroups
- Mash-based analyses of Escherichia coli genomes reveal 14 distinct phylogroups
- Mash-based analyses of Escherichia coli genomes reveal 14 distinct phylogroups
- Mash-based analyses of Escherichia coli genomes reveal 14 distinct phylogroups
- Isolation of AmpC- and extended spectrum β-lactamase-producing Enterobacterales from fresh vegetables in the United States
- Isolation of AmpC- and extended spectrum β-lactamase-producing Enterobacterales from fresh vegetables in the United States
- Isolation of AmpC- and extended spectrum β-lactamase-producing Enterobacterales from fresh vegetables in the United States
- Isolation of AmpC- and extended spectrum β-lactamase-producing Enterobacterales from fresh vegetables in the United States
- Complete Genome Sequence of a Non-Carbapenemase-Producing Carbapenem-Resistant Providencia rettgeri Strain Isolated from a Clinical Urine Sample in Arkansas
- Complete Genome Sequence of a Non-Carbapenemase-Producing Carbapenem-Resistant Providencia rettgeri Strain Isolated from a Clinical Urine Sample in Arkansas
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