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Current · Arkansas
Last published
2026
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OpenAlex · ORCID
Refreshed
2026-10-06
P
Piroon Jenjaroenpun
High Impact
Ph.D.
Also affiliated: Kunming University of Science and Technology (2018); Agency for Science, Technology and Research (2013–2023); Siriraj Hospital (2018–2026); Nanyang Technological University (2011); Kasetsart University (2014); Mahidol University (2018–2026); Molecular Microbiology and Genomics Consultants (Germany) (2018); Bioinformatics Institute (2009–2023)
32 h-index
178 pubs
3,677 cited
Research Areas
Biomedical Subjects
Links
Biography and Research Information
OverviewAI-generated summary
Piroon Jenjaroenpun's research focuses on the application of advanced sequencing technologies to analyze biological systems. His work has investigated the epitranscriptional landscape of native RNA sequences, the characterization of RNA within exosomes from human breast cancer cell lines, and the complete genomic and transcriptional landscape of Saccharomyces cerevisiae using third-generation sequencing.
Further research has explored the upregulation of PARP1 in non-small cell lung cancer tissues in the presence of microcystin, and assessed the safety of a Lactobacillus plantarum starter culture through whole-genome analysis. Jenjaroenpun has also studied the role of EVI1 in regulating cellular processes relevant to cancer and its synergistic interactions with FOS protein. His other research interests include quantitative modeling of R-loop forming structures to understand RNA-DNA interactome complexity and performing chromosome-level genome assembly for species such as the black tiger shrimp to identify growth-associated genes.
Jenjaroenpun leads a research group and has a significant publication record, with 176 total publications and 3,649 citations, contributing to a h-index of 32. He has collaborated with several researchers at the University of Arkansas for Medical Sciences, including Thidathip Wongsurawat (46 shared publications), Intawat Nookaew (12 shared publications), Visanu Wanchai (3 shared publications), and David W. Ussery (1 shared publication).
Metrics
- h-index: 32
- Publications: 178
- Citations: 3,677
Positions
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Ph.D. publications 2017–2026University of Arkansas for Medical Sciences Institution web page
Selected Publications
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Intra-amniotic infection: diagnosis, nomenclature, clinical significance, management, and microbiologic tools used for the diagnosis (2026)
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Comparative genomics of colistin-nonsusceptible multidrug-resistant Pseudomonas aeruginosa reveals emerging lineages in Thailand (2026)
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Enhancing CYP2D6 genotyping with nanopore sequencing to address allele diversity P. vivax malaria elimination (2025)
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Optimizing fungal DNA extraction and purification for Oxford Nanopore untargeted shotgun metagenomic sequencing from simulated hemoculture specimens (2025)
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Comparative evaluation of commercial DNA isolation approaches for nanopore-only bacterial genome assembly and plasmid recovery (2024)
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CAIM: coverage-based analysis for identification of microbiome (2024)
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Isolation and Genomic Characterization of Schaalia turicensis from a Patient with Gonococcal Urethritis, Thailand (2024)
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CAIM: Coverage-based Analysis for Identification of Microbiome (2024)
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GLIMMERS: glioma molecular markers exploration using long-read sequencing (2024)
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Comparative Evaluation of Commercial DNA Isolation Approaches for Nanopore-only Bacterial Genome Assembly and Plasmid Recovery (2024)
Collaboration Network
Top Collaborators
Thidathip Wongsurawat
Siriraj Hospital
68 shared publications
In database
- Decoding the epitranscriptional landscape from native RNA sequences
- Complete genomic and transcriptional landscape analysis using third-generation sequencing: a case study of Saccharomyces cerevisiae CEN.PK113-7D
- PARP1 Is Up-Regulated in Non-small Cell Lung Cancer Tissues in the Presence of the Cyanobacterial Toxin Microcystin
- Safety Assessment of a Nham Starter Culture Lactobacillus plantarum BCC9546 via Whole-genome Analysis
- A chromosome‐level assembly of the black tiger shrimp ( Penaeus monodon ) genome facilitates the identification of growth‐associated genes
Showing 5 of 68 shared publications
Intawat Nookaew
Siriraj Hospital
48 shared publications
In database
- Decoding the epitranscriptional landscape from native RNA sequences
- Complete genomic and transcriptional landscape analysis using third-generation sequencing: a case study of Saccharomyces cerevisiae CEN.PK113-7D
- PARP1 Is Up-Regulated in Non-small Cell Lung Cancer Tissues in the Presence of the Cyanobacterial Toxin Microcystin
- Safety Assessment of a Nham Starter Culture Lactobacillus plantarum BCC9546 via Whole-genome Analysis
- A chromosome‐level assembly of the black tiger shrimp ( Penaeus monodon ) genome facilitates the identification of growth‐associated genes
Showing 5 of 48 shared publications
David W. Ussery
University of Arkansas for Medical Sciences
21 shared publications
In database
- Decoding the epitranscriptional landscape from native RNA sequences
- Complete genomic and transcriptional landscape analysis using third-generation sequencing: a case study of Saccharomyces cerevisiae CEN.PK113-7D
- PARP1 Is Up-Regulated in Non-small Cell Lung Cancer Tissues in the Presence of the Cyanobacterial Toxin Microcystin
- Case of Microcephaly after Congenital Infection with Asian Lineage Zika Virus, Thailand
- Rapid Sequencing of Multiple RNA Viruses in Their Native Form
Showing 5 of 21 shared publications
Se‐Ran Jun
University of Arkansas for Medical Sciences
8 shared publications
In database
- Case of Microcephaly after Congenital Infection with Asian Lineage Zika Virus, Thailand
- KITSUNE: A Tool for Identifying Empirically Optimal K-mer Length for Alignment-Free Phylogenomic Analysis
- Two Cases of Vancomycin-Resistant Enterococcus faecium Bacteremia With Development of Daptomycin-Resistant Phenotype and its Detection Using Oxford Nanopore Sequencing
- Genomic characterization of mumps viruses from a large-scale mumps outbreak in Arkansas, 2016
- Genome-Based Comparison of Clostridioides difficile: Average Amino Acid Identity Analysis of Core Genomes
Showing 5 of 8 shared publications
Wonnop Visessanguan
National Centre for Genetic Resources and Biotechnology (NG)
7 shared publications
- Safety Assessment of a Nham Starter Culture Lactobacillus plantarum BCC9546 via Whole-genome Analysis
- Genome sequences of antibiotic-resistant Streptococcus suis strains isolated from human patients and diseased and asymptomatic pigs in Thailand
- Additional file 4 of Revisiting chloroplast genomic landscape and annotation towards comparative chloroplast genomes of Rhamnaceae
- Additional file 6 of Revisiting chloroplast genomic landscape and annotation towards comparative chloroplast genomes of Rhamnaceae
- Additional file 3 of Revisiting chloroplast genomic landscape and annotation towards comparative chloroplast genomes of Rhamnaceae
Showing 5 of 7 shared publications
Tantip Arigul
Siriraj Hospital (TH)
6 shared publications
- Comparative evaluation of commercial DNA isolation approaches for nanopore-only bacterial genome assembly and plasmid recovery
- Exploiting nanopore sequencing for characterization and grading of IDH‐mutant gliomas
- Nanopore Sequencing Discloses Compositional Quality of Commercial Probiotic Feed Supplements
- GLIMMERS: glioma molecular markers exploration using long-read sequencing
- Comparative Evaluation of Commercial DNA Isolation Approaches for Nanopore-only Bacterial Genome Assembly and Plasmid Recovery
Showing 5 of 6 shared publications
Duah Alkam
University of Arkansas for Medical Sciences
5 shared publications
In database
- A novel Cas9-targeted long-read assay for simultaneous detection of IDH1/2 mutations and clinically relevant MGMT methylation in fresh biopsies of diffuse glioma
- Genomic characterization of mumps viruses from a large-scale mumps outbreak in Arkansas, 2016
- The Increased Accumulation of Staphylococcus aureus Virulence Factors Is Maximized in a purR Mutant by the Increased Production of SarA and Decreased Production of Extracellular Proteases
- Three Complete Genome Sequences of Genotype G Mumps Virus from the 2016 Outbreak in Arkansas, USA
- Is amplification bias consequential in transposon sequencing (TnSeq) assays? A case study with a Staphylococcus aureus TnSeq library subjected to PCR-based and amplification-free enrichment methods
Trudy M. Wassenaar
Molecular Microbiology and Genomics Consultants (Germany) (DE)
5 shared publications
- Decoding the epitranscriptional landscape from native RNA sequences
- Case of Microcephaly after Congenital Infection with Asian Lineage Zika Virus, Thailand
- Decoding the Epitranscriptional Landscape from Native RNA Sequences
- Genome-Based Comparison of Clostridioides difficile: Average Amino Acid Identity Analysis of Core Genomes
- Three Complete Genome Sequences of Genotype G Mumps Virus from the 2016 Outbreak in Arkansas, USA
Atul Kothari
University of Arkansas for Medical Sciences
5 shared publications
In database
- Two Cases of Vancomycin-Resistant Enterococcus faecium Bacteremia With Development of Daptomycin-Resistant Phenotype and its Detection Using Oxford Nanopore Sequencing
- Genome-Based Comparison of Clostridioides difficile: Average Amino Acid Identity Analysis of Core Genomes
- Complete Genome Sequences of Four Isolates of Vancomycin-Resistant Enterococcus faecium with the vanA Gene and Two Daptomycin Resistance Mutations, Obtained from Two Inpatients with Prolonged Bacteremia
- Draft Genome Sequences of 48 Vancomycin-Resistant Enterococcus faecium Strains Isolated from Inpatients with Bacteremia and Urinary Tract Infection
- 487. Severity and Clinical Outcomes of Clostridium difficile Infection Based on Toxin B Assay Results
Mariah K. Taylor
University of Tennessee Health Science Center (US)
5 shared publications
- Rapid Sequencing of Multiple RNA Viruses in Their Native Form
- Amplicon-Based, Next-Generation Sequencing Approaches to Characterize Single Nucleotide Polymorphisms of Orthohantavirus Species
- Dissecting Phenotype from Genotype with Clinical Isolates of SARS-CoV-2 First Wave Variants
- Corrigendum: Amplicon-Based, Next-Generation Sequencing Approaches to Characterize Single Nucleotide Polymorphisms of Orthohantavirus Species
- Rapid Sequencing of Multiple RNA Viruses in their Native Form
Sangam Kandel
University of Wisconsin–Madison
5 shared publications
In database
- Rapid Sequencing of Multiple RNA Viruses in Their Native Form
- 16S rRNA Gene Amplicon Profiling of Baby and Adult Captive Elephants in Thailand
- CAIM: coverage-based analysis for identification of microbiome
- CAIM: Coverage-based Analysis for Identification of Microbiome
- Rapid Sequencing of Multiple RNA Viruses in their Native Form
Taylor D. Wadley
University of Arkansas for Medical Sciences
5 shared publications
In database
- Decoding the epitranscriptional landscape from native RNA sequences
- Rapid Sequencing of Multiple RNA Viruses in Their Native Form
- Decoding the Epitranscriptional Landscape from Native RNA Sequences
- Complete Genome and Plasmid Sequences of Escherichia coli Type Strain ATCC 11775
- Rapid Sequencing of Multiple RNA Viruses in their Native Form
Colleen B. Jonsson
University of Tennessee Health Science Center (US)
5 shared publications
- Rapid Sequencing of Multiple RNA Viruses in Their Native Form
- Amplicon-Based, Next-Generation Sequencing Approaches to Characterize Single Nucleotide Polymorphisms of Orthohantavirus Species
- Dissecting Phenotype from Genotype with Clinical Isolates of SARS-CoV-2 First Wave Variants
- Corrigendum: Amplicon-Based, Next-Generation Sequencing Approaches to Characterize Single Nucleotide Polymorphisms of Orthohantavirus Species
- Rapid Sequencing of Multiple RNA Viruses in their Native Form
Zulema Udaondo
University of Arkansas for Medical Sciences (US)
5 shared publications
- Comparative Analysis of PacBio and Oxford Nanopore Sequencing Technologies for Transcriptomic Landscape Identification of Penaeus monodon
- Two Cases of Vancomycin-Resistant Enterococcus faecium Bacteremia With Development of Daptomycin-Resistant Phenotype and its Detection Using Oxford Nanopore Sequencing
- Genomic characterization of mumps viruses from a large-scale mumps outbreak in Arkansas, 2016
- Complete Genome Sequences of Four Isolates of Vancomycin-Resistant Enterococcus faecium with the vanA Gene and Two Daptomycin Resistance Mutations, Obtained from Two Inpatients with Prolonged Bacteremia
- Draft Genome Sequences of 48 Vancomycin-Resistant Enterococcus faecium Strains Isolated from Inpatients with Bacteremia and Urinary Tract Infection
Chanwit Tribuddharat
Siriraj Hospital (TH)
5 shared publications
- Whole-genome sequence analysis of high-level penicillin-resistant strains and antimicrobial susceptibility of Neisseria gonorrhoeae clinical isolates from Thailand
- Complete Genome Sequences of Three Neisseria gonorrhoeae Isolates from Thailand with Multidrug Resistance and Multilocus Sequence Type 1903
- Complete Genome Sequence of Schaalia turicensis Strain CT001, Isolated from a Patient with Gonococcal Urethritis in Thailand
- Complete Genome Sequence of Neisseria gonorrhoeae Multilocus Sequence Type ST7363 Isolated from Thailand
- Isolation and Genomic Characterization of Schaalia turicensis from a Patient with Gonococcal Urethritis, Thailand
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