Y
Ying Fu Data-verified
Affiliation confirmed via AI analysis of OpenAlex, ORCID, and web sources.
High Impact
Researcher
faculty
34 h-index
197 pubs
4,180 cited
Research Areas
Biography and Research Information
OverviewAI-generated summary
Ying Fu is a faculty member at the University of Arkansas at Fayetteville with a research focus that spans microbial ecology, antibiotic resistance, and the mechanobiology of cellular processes. Fu's work investigates the factors influencing microbial diversity in soil, including the impact of climate warming and nutrient availability, and explores the role of specific metabolites in linking soil microbiomes and plant rhizospheres. This research is supported by multiple federal grants from the National Institutes of Health (NIH), totaling over $1.4 million, which fund investigations into mechanobiology, cell sorting based on contractility, and the dissection of genetic variation underlying complex traits in model organisms.
Fu has co-authored publications on the evolution of antibiotic resistance in hypervirulent bacterial strains, such as *Klebsiella pneumoniae*, and the identification of resistance mechanisms using advanced technologies like plasmonic nanosensors and machine learning. The researcher's scholarly output includes 197 publications, with an h-index of 34 and over 4,000 citations, indicating a significant contribution to their fields. Collaborations include work with Xiaolun Sun and Tahrir Alenezi from the University of Arkansas at Fayetteville, among others, highlighting an active research network.
Metrics
- h-index: 34
- Publications: 197
- Citations: 4,180
Selected Publications
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Recombinant Bile Salt Hydrolase Enhances the Inhibition Efficiency of Taurodeoxycholic Acid against Clostridium perfringens Virulence (2024)
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Potent Bile Acid Microbial Metabolites Modulate Clostridium perfringens Virulence (2023)
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Vaccines Using Clostridium perfringens Sporulation Proteins Reduce Necrotic Enteritis in Chickens (2022)
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Clostridium perfringens-Induced Necrotic Diseases: An Overview (2022)
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Specific Secondary Bile Acids Control Chicken Necrotic Enteritis (2021)
Federal Grants 5 $1,433,308 total
NIH/National Institute of General Medical Sciences
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Sep 2025 - Jun 2030
Investigating the mechanobiology of multicellular morphogenesis
NIH/National Institute of General Medical Sciences
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Sep 2025 - Jun 2030
Decoding Gene-Environment Interactions in Complex Traits via Multi-Omics Approaches
NIH/National Institute of General Medical Sciences
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Sep 2023 - Aug 2026
Dissecting cryptic genetic variation underlying complex traits in Drosophila
NIH/National Institute of Biomedical Imaging and Bioengineering
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Aug 2023 - Jul 2026
NIH/National Institute of General Medical Sciences
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Sep 2022 - Aug 2025
Developing branch stress microscopy for the mechanobiology of 3D morphogenesis and invasive diseases
Collaboration Network
Top Collaborators
Yunsong Yu
Sir Run Run Shaw Hospital (CN)
20 shared publications
- Resistance evolution of hypervirulent carbapenem-resistant <i>Klebsiella pneumoniae</i> ST11 during treatment with tigecycline and polymyxin
- Whole-genome sequencing unveils the outbreak of Mycoplasma pneumoniae in mainland China
- Emergence of carbapenem-resistant Klebsiella pneumoniae harbouring bla OXA-48-like genes in China
- Acinetobacter baumannii strains isolated from cerebrospinal fluid (CSF) and bloodstream analysed by cgMLST: the dominance of clonal complex CC92 in CSF infections
- Epidemiological Characteristics of OXA-232-Producing Carbapenem-Resistant Klebsiella pneumoniae Strains Isolated during Nosocomial Clonal Spread Associated with Environmental Colonization
Showing 5 of 20 shared publications
Xiaoting Hua
Sir Run Run Shaw Hospital (CN)
9 shared publications
- Resistance evolution of hypervirulent carbapenem-resistant <i>Klebsiella pneumoniae</i> ST11 during treatment with tigecycline and polymyxin
- Emergence of carbapenem-resistant Klebsiella pneumoniae harbouring bla OXA-48-like genes in China
- Acinetobacter baumannii strains isolated from cerebrospinal fluid (CSF) and bloodstream analysed by cgMLST: the dominance of clonal complex CC92 in CSF infections
- Comparing core-genome MLST with PFGE and MLST for cluster analysis of carbapenem-resistant Acinetobacter baumannii
- Description of a Rare Pyomelanin-Producing Carbapenem-Resistant Acinetobacter baumannii Strain Coharboring Chromosomal OXA-23 and NDM-1
Showing 5 of 9 shared publications
Yan Jiang
Sir Run Run Shaw Hospital (CN)
8 shared publications
- Resistance evolution of hypervirulent carbapenem-resistant <i>Klebsiella pneumoniae</i> ST11 during treatment with tigecycline and polymyxin
- Emergence of carbapenem-resistant Klebsiella pneumoniae harbouring bla OXA-48-like genes in China
- Acinetobacter baumannii strains isolated from cerebrospinal fluid (CSF) and bloodstream analysed by cgMLST: the dominance of clonal complex CC92 in CSF infections
- Epidemiological Characteristics of OXA-232-Producing Carbapenem-Resistant Klebsiella pneumoniae Strains Isolated during Nosocomial Clonal Spread Associated with Environmental Colonization
- Comparing core-genome MLST with PFGE and MLST for cluster analysis of carbapenem-resistant Acinetobacter baumannii
Showing 5 of 8 shared publications
Jizhong Zhou
University of Oklahoma (US)
7 shared publications
- Reduction of microbial diversity in grassland soil is driven by long-term climate warming
- Nutrient and moisture limitations reveal keystone metabolites linking rhizosphere metabolomes and microbiomes
- Direct cell extraction from fresh and stored soil samples: Impact on microbial viability and community compositions
- Conversion of marginal land into switchgrass conditionally accrues soil carbon but reduces methane consumption
- Ecophysiological and genomic analyses of a representative isolate of highly abundant <scp> <i>Bacillus cereus</i> </scp> strains in contaminated subsurface sediments
Showing 5 of 7 shared publications
Daliang Ning
University of Oklahoma (US)
5 shared publications
- Reduction of microbial diversity in grassland soil is driven by long-term climate warming
- Conversion of marginal land into switchgrass conditionally accrues soil carbon but reduces methane consumption
- Ecophysiological and genomic analyses of a representative isolate of highly abundant <scp> <i>Bacillus cereus</i> </scp> strains in contaminated subsurface sediments
- Experimental warming leads to convergent succession of grassland archaeal community
- Reproducible responses of geochemical and microbial successional patterns in the subsurface to carbon source amendment
Liyou Wu
University of Oklahoma (US)
5 shared publications
- Reduction of microbial diversity in grassland soil is driven by long-term climate warming
- Nutrient and moisture limitations reveal keystone metabolites linking rhizosphere metabolomes and microbiomes
- Conversion of marginal land into switchgrass conditionally accrues soil carbon but reduces methane consumption
- Experimental warming leads to convergent succession of grassland archaeal community
- Nutrient and moisture limitation reveal keystone metabolites that link switchgrass rhizosphere metabolome and microbiome dynamics
Haiyang Dong
Zhejiang University (CN)
5 shared publications
- Intron-targeted mutagenesis reveals roles for Dscam1 RNA pairing architecture-driven splicing bias in neuronal wiring
- Self-avoidance alone does not explain the function of Dscam1 in mushroom body axonal wiring
- Hidden RNA pairings counteract the “first-come, first-served” splicing principle to drive stochastic choice in <i>Dscam1</i> splice variants
- Trans-splicing facilitated by RNA pairing greatly expands sDscam isoform diversity but not homophilic binding specificity
- A systematic CRISPR screen reveals redundant and specific roles for Dscam1 isoform diversity in neuronal wiring
Bingbing Xu
Zhejiang University (CN)
5 shared publications
- Intron-targeted mutagenesis reveals roles for Dscam1 RNA pairing architecture-driven splicing bias in neuronal wiring
- Self-avoidance alone does not explain the function of Dscam1 in mushroom body axonal wiring
- Hidden RNA pairings counteract the “first-come, first-served” splicing principle to drive stochastic choice in <i>Dscam1</i> splice variants
- Trans-splicing facilitated by RNA pairing greatly expands sDscam isoform diversity but not homophilic binding specificity
- A systematic CRISPR screen reveals redundant and specific roles for Dscam1 isoform diversity in neuronal wiring
Feng Shi
Zhejiang University (CN)
5 shared publications
- Intron-targeted mutagenesis reveals roles for Dscam1 RNA pairing architecture-driven splicing bias in neuronal wiring
- Self-avoidance alone does not explain the function of Dscam1 in mushroom body axonal wiring
- Hidden RNA pairings counteract the “first-come, first-served” splicing principle to drive stochastic choice in <i>Dscam1</i> splice variants
- Trans-splicing facilitated by RNA pairing greatly expands sDscam isoform diversity but not homophilic binding specificity
- A systematic CRISPR screen reveals redundant and specific roles for Dscam1 isoform diversity in neuronal wiring
Yongfeng Jin
Zhejiang University (CN)
5 shared publications
- Intron-targeted mutagenesis reveals roles for Dscam1 RNA pairing architecture-driven splicing bias in neuronal wiring
- Self-avoidance alone does not explain the function of Dscam1 in mushroom body axonal wiring
- Hidden RNA pairings counteract the “first-come, first-served” splicing principle to drive stochastic choice in <i>Dscam1</i> splice variants
- Trans-splicing facilitated by RNA pairing greatly expands sDscam isoform diversity but not homophilic binding specificity
- A systematic CRISPR screen reveals redundant and specific roles for Dscam1 isoform diversity in neuronal wiring
Tahrir Alenezi
University of Arkansas at Fayetteville
5 shared publications
In database
- Clostridium perfringens-Induced Necrotic Diseases: An Overview
- Specific Secondary Bile Acids Control Chicken Necrotic Enteritis
- Vaccines Using Clostridium perfringens Sporulation Proteins Reduce Necrotic Enteritis in Chickens
- Potent Bile Acid Microbial Metabolites Modulate Clostridium perfringens Virulence
- Recombinant Bile Salt Hydrolase Enhances the Inhibition Efficiency of Taurodeoxycholic Acid against Clostridium perfringens Virulence
Xiaolun Sun
University of Arkansas at Fayetteville
5 shared publications
In database
- Clostridium perfringens-Induced Necrotic Diseases: An Overview
- Specific Secondary Bile Acids Control Chicken Necrotic Enteritis
- Vaccines Using Clostridium perfringens Sporulation Proteins Reduce Necrotic Enteritis in Chickens
- Potent Bile Acid Microbial Metabolites Modulate Clostridium perfringens Virulence
- Recombinant Bile Salt Hydrolase Enhances the Inhibition Efficiency of Taurodeoxycholic Acid against Clostridium perfringens Virulence
Feng Zhao
Sir Run Run Shaw Hospital (CN)
5 shared publications
- Description of a Rare Pyomelanin-Producing Carbapenem-Resistant Acinetobacter baumannii Strain Coharboring Chromosomal OXA-23 and NDM-1
- Development of a novel core genome MLST scheme for tracing multidrug resistant Staphylococcus capitis
- High-level ceftriaxone resistance due to transfer of <i>penA</i> allele 60.001 into endemic gonococcal lineages in Hangzhou, China
- Co-colonization of different species harboring KPC or NDM carbapenemase in the same host gut: insight of resistance evolution by horizontal gene transfer
- A large-scale surveillance revealed that KPC variants mediated ceftazidime-avibactam resistance in clinically isolated <i>Klebsiella pneumoniae</i>
Yunxing Yang
Zhejiang University (CN)
4 shared publications
- Emergence of carbapenem-resistant Klebsiella pneumoniae harbouring bla OXA-48-like genes in China
- Comparing core-genome MLST with PFGE and MLST for cluster analysis of carbapenem-resistant Acinetobacter baumannii
- Co‐evolutionary adaptations of <i>Acinetobacter baumannii</i> and a clinical carbapenemase‐encoding plasmid during carbapenem exposure
- Alteration of <i>adeS</i> Contributes to Tigecycline Resistance and Collateral Sensitivity to Sulbactam in Acinetobacter baumannii
Yunfeng Yang
State Key Joint Laboratory of Environment Simulation and Pollution Control (CN)
4 shared publications
- Reduction of microbial diversity in grassland soil is driven by long-term climate warming
- Conversion of marginal land into switchgrass conditionally accrues soil carbon but reduces methane consumption
- Experimental warming leads to convergent succession of grassland archaeal community
- Reproducible responses of geochemical and microbial successional patterns in the subsurface to carbon source amendment
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