Qiang Shi Data-verified
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Senior Staff Fellow
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Biography and Research Information
OverviewAI-generated summary
Qiang Shi's research investigates mechanisms of drug-induced liver injury and explores the role of ubiquitination in cellular processes. His work has included the co-culture of human primary hepatocytes and nonparenchymal liver cells in a liver-chip model to study drug-induced liver injury. Shi has also examined the structural and mechanistic aspects of deubiquitination by specific enzymes, such as USP16's role in H2AK119 deubiquitination.
Further research by Shi has delved into the role of ferroptosis in Alzheimer's disease and the protective effects of combined nicotinamide mononucleotide and lycopene against cognitive impairment and oxidative damage in aging models, mediated by the Keap1-Nrf2 signaling pathway. His publications also cover the creation of synthetic ubiquitinated nucleosome conjugates for studying ubiquitination processes and the development of DNAzyme-based methods for identifying low-abundance biomarkers.
Metrics
- h-index: 34
- Publications: 203
- Citations: 10,570
Selected Publications
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Pexidartinib impairs liver mitochondrial functions causing cell death in primary human hepatocytes at clinically relevant concentrations (2025)
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Single-cell RNA-sequencing and subcellular spatial transcriptomics facilitate the translation of liver microphysiological systems for regulatory application (2023)
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Co‐Culture of Human Primary Hepatocytes and Nonparenchymal Liver Cells in the Emulate® Liver‐Chip for the Study of Drug‐Induced Liver Injury (2022)
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Metabolism of carcinogenic pyrrolizidine alkaloids and pyrrolizidine alkaloid<i>N</i>-oxides by rat primary hepatocytes generate the same characteristic DHP-DNA adducts (2021)
Collaboration Network
Top Collaborators
- Narrow-band notch filter and refractive index sensor based on rectangular-semi-annular cavity coupled with MIM waveguide structure
- Dual-function tunable metasurface for polarization-insensitive electromagnetic induction transparency and dual-band absorption
- High-Q optical metasurfaces: from quasi-BIC modulation to ultra-narrowband absorption in the near-infrared spectrum
- Tunable plasmon refractive index sensor and a slow-light device optimized by an improved genetic algorithm based on a MIM waveguide
- Switchable bi-functional metasurface for absorption and broadband polarization conversion in terahertz band using vanadium dioxide and photosensitive silicon
Showing 5 of 9 shared publications
- Narrow-band notch filter and refractive index sensor based on rectangular-semi-annular cavity coupled with MIM waveguide structure
- Dual-function tunable metasurface for polarization-insensitive electromagnetic induction transparency and dual-band absorption
- High-Q optical metasurfaces: from quasi-BIC modulation to ultra-narrowband absorption in the near-infrared spectrum
- Tunable plasmon refractive index sensor and a slow-light device optimized by an improved genetic algorithm based on a MIM waveguide
- Switchable bi-functional metasurface for absorption and broadband polarization conversion in terahertz band using vanadium dioxide and photosensitive silicon
Showing 5 of 8 shared publications
- Dual-function tunable metasurface for polarization-insensitive electromagnetic induction transparency and dual-band absorption
- High-Q optical metasurfaces: from quasi-BIC modulation to ultra-narrowband absorption in the near-infrared spectrum
- Tunable plasmon refractive index sensor and a slow-light device optimized by an improved genetic algorithm based on a MIM waveguide
- Switchable bi-functional metasurface for absorption and broadband polarization conversion in terahertz band using vanadium dioxide and photosensitive silicon
- Multiple Fano resonances inspired by bound states in all-dielectric double-opening resonant ring metasurfaces
Showing 5 of 8 shared publications
- Synthetic E2-Ub-nucleosome conjugates for studying nucleosome ubiquitination
- Synovial sarcoma X breakpoint 1 protein uses a cryptic groove to selectively recognize H2AK119Ub nucleosomes
- Mechanistic insights into nucleosomal H2B monoubiquitylation mediated by yeast Bre1-Rad6 and its human homolog RNF20/RNF40-hRAD6A
- Structural and mechanistic basis for nucleosomal H2AK119 deubiquitination by single-subunit deubiquitinase USP16
- Mechanism of nucleosomal H2A K13/15 monoubiquitination and adjacent dual monoubiquitination by RNF168
Showing 5 of 7 shared publications
- Synthetic E2-Ub-nucleosome conjugates for studying nucleosome ubiquitination
- Synovial sarcoma X breakpoint 1 protein uses a cryptic groove to selectively recognize H2AK119Ub nucleosomes
- Mechanistic insights into nucleosomal H2B monoubiquitylation mediated by yeast Bre1-Rad6 and its human homolog RNF20/RNF40-hRAD6A
- Structural and mechanistic basis for nucleosomal H2AK119 deubiquitination by single-subunit deubiquitinase USP16
- Mechanism of nucleosomal H2A K13/15 monoubiquitination and adjacent dual monoubiquitination by RNF168
Showing 5 of 7 shared publications
- Synthetic E2-Ub-nucleosome conjugates for studying nucleosome ubiquitination
- Synovial sarcoma X breakpoint 1 protein uses a cryptic groove to selectively recognize H2AK119Ub nucleosomes
- Mechanistic insights into nucleosomal H2B monoubiquitylation mediated by yeast Bre1-Rad6 and its human homolog RNF20/RNF40-hRAD6A
- Structural and mechanistic basis for nucleosomal H2AK119 deubiquitination by single-subunit deubiquitinase USP16
- Mechanism of nucleosomal H2A K13/15 monoubiquitination and adjacent dual monoubiquitination by RNF168
Showing 5 of 7 shared publications
- Synthetic E2-Ub-nucleosome conjugates for studying nucleosome ubiquitination
- Synovial sarcoma X breakpoint 1 protein uses a cryptic groove to selectively recognize H2AK119Ub nucleosomes
- Mechanistic insights into nucleosomal H2B monoubiquitylation mediated by yeast Bre1-Rad6 and its human homolog RNF20/RNF40-hRAD6A
- Structural and mechanistic basis for nucleosomal H2AK119 deubiquitination by single-subunit deubiquitinase USP16
- Mechanism of nucleosomal H2A K13/15 monoubiquitination and adjacent dual monoubiquitination by RNF168
Showing 5 of 7 shared publications
- Synthetic E2-Ub-nucleosome conjugates for studying nucleosome ubiquitination
- Synovial sarcoma X breakpoint 1 protein uses a cryptic groove to selectively recognize H2AK119Ub nucleosomes
- Mechanistic insights into nucleosomal H2B monoubiquitylation mediated by yeast Bre1-Rad6 and its human homolog RNF20/RNF40-hRAD6A
- Structural and mechanistic basis for nucleosomal H2AK119 deubiquitination by single-subunit deubiquitinase USP16
- Mechanism of nucleosomal H2A K13/15 monoubiquitination and adjacent dual monoubiquitination by RNF168
Showing 5 of 7 shared publications
- Synthetic E2-Ub-nucleosome conjugates for studying nucleosome ubiquitination
- Synovial sarcoma X breakpoint 1 protein uses a cryptic groove to selectively recognize H2AK119Ub nucleosomes
- Mechanistic insights into nucleosomal H2B monoubiquitylation mediated by yeast Bre1-Rad6 and its human homolog RNF20/RNF40-hRAD6A
- Structural and mechanistic basis for nucleosomal H2AK119 deubiquitination by single-subunit deubiquitinase USP16
- Mechanism of nucleosomal H2A K13/15 monoubiquitination and adjacent dual monoubiquitination by RNF168
Showing 5 of 6 shared publications
- Synthetic E2-Ub-nucleosome conjugates for studying nucleosome ubiquitination
- Synovial sarcoma X breakpoint 1 protein uses a cryptic groove to selectively recognize H2AK119Ub nucleosomes
- Mechanistic insights into nucleosomal H2B monoubiquitylation mediated by yeast Bre1-Rad6 and its human homolog RNF20/RNF40-hRAD6A
- Mechanism of nucleosomal H2A K13/15 monoubiquitination and adjacent dual monoubiquitination by RNF168
- Synovial 1 Sarcoma X Breakpoint Protein Uses a Cryptic Groove to Selectively Recognize H2AK119Ub Nucleosomes
- Climate variability during the late Ediacaran: Insights from episodic deposition of black shale-hosted Mn‑carbonates in South China
- Manganese carbonate stromatolites of the Ediacaran Doushantuo Formation in Chengkou, northern Yangtze Craton, China
- Stratigraphic framework and sedimentary evolution during the Cryogenian-Ediacaran transition in northeastern Sichuan Basin, South China
- Extreme organic matter enrichment in the Ediacaran Doushantuo formation: New constraints from the NE Sichuan basin, China
- Synthetic E2-Ub-nucleosome conjugates for studying nucleosome ubiquitination
- Synovial sarcoma X breakpoint 1 protein uses a cryptic groove to selectively recognize H2AK119Ub nucleosomes
- Mechanistic insights into nucleosomal H2B monoubiquitylation mediated by yeast Bre1-Rad6 and its human homolog RNF20/RNF40-hRAD6A
- Synovial 1 Sarcoma X Breakpoint Protein Uses a Cryptic Groove to Selectively Recognize H2AK119Ub Nucleosomes
- Synthetic E2-Ub-nucleosome conjugates for studying nucleosome ubiquitination
- Synovial sarcoma X breakpoint 1 protein uses a cryptic groove to selectively recognize H2AK119Ub nucleosomes
- Mechanistic insights into nucleosomal H2B monoubiquitylation mediated by yeast Bre1-Rad6 and its human homolog RNF20/RNF40-hRAD6A
- Synovial 1 Sarcoma X Breakpoint Protein Uses a Cryptic Groove to Selectively Recognize H2AK119Ub Nucleosomes
- Synthetic E2-Ub-nucleosome conjugates for studying nucleosome ubiquitination
- Synovial sarcoma X breakpoint 1 protein uses a cryptic groove to selectively recognize H2AK119Ub nucleosomes
- Mechanism of nucleosomal H2A K13/15 monoubiquitination and adjacent dual monoubiquitination by RNF168
- Synovial 1 Sarcoma X Breakpoint Protein Uses a Cryptic Groove to Selectively Recognize H2AK119Ub Nucleosomes
- Synovial sarcoma X breakpoint 1 protein uses a cryptic groove to selectively recognize H2AK119Ub nucleosomes
- Structural and mechanistic basis for nucleosomal H2AK119 deubiquitination by single-subunit deubiquitinase USP16
- Promotion of RNF168‐Mediated Nucleosomal H2A Ubiquitylation by Structurally Defined K63‐Polyubiquitylated Linker Histone H1
- Synovial 1 Sarcoma X Breakpoint Protein Uses a Cryptic Groove to Selectively Recognize H2AK119Ub Nucleosomes
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