S
Shadi A. Badiee Data-verified
Affiliation confirmed via AI analysis of OpenAlex, ORCID, and web sources.
Researcher
faculty
4 h-index
16 pubs
60 cited
Research Areas
Links
Biography and Research Information
OverviewAI-generated summary
Shadi A. Badiee's research focuses on understanding the molecular dynamics and conformational changes of proteins, particularly those involved in cellular transport and viral functions. Using computational methods such as molecular dynamics simulations, Badiee investigates the behavior of membrane proteins, including multidrug resistance transporters and viral hemagglutinin glycoproteins. Recent work has examined the role of cholesterol in the function of Class C G protein-coupled receptors (GPCRs) and the alternating access mechanism in mammalian and bacterial transporters. Badiee also studies conformational dynamics in bacterial membrane insertases and the influenza hemagglutinin protein, exploring how changes in pH affect its structure. Collaborations with researchers at the University of Arkansas at Fayetteville, including Mahmoud Moradi and Ehsaneh Khodadadi, have resulted in multiple shared publications.
Metrics
- h-index: 4
- Publications: 16
- Citations: 60
Selected Publications
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Lipid-Mediated Modulation of mGluR2 Embedded in Micelle and Bilayer Environments: Insights from Molecular Dynamics (2025)
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Structural Stability Comparisons Between Natural and Engineered Group II Chaperonins: Are Crenarchaeal “Heat Shock” Proteins Also “pH Shock” Resistant? (2024)
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Molecular Dynamics Investigation of the Influenza Hemagglutinin Conformational Changes in Acidic pH (2024)
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Deciphering the Interdomain Coupling in a Gram-Negative Bacterial Membrane Insertase (2024)
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Molecular dynamics investigation of the influenza hemagglutinin conformational changes in acidic pH (2024)
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Lipid-dependent conformational dynamics of bacterial ATP-binding cassette transporter Sav1866 (2024)
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Cholesterol Dependence of the Conformational Changes in Metabotropic Glutamate Receptor 1 (2024)
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Cholesterol-regulated conformational dynamics and stability of mGluR2 embedded in detergent micelles: Insights from molecular dynamics (2024)
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The Alternating Access Mechanism in Mammalian Multidrug Resistance Transporters and Their Bacterial Homologs (2023)
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Cholesterol in Class C GPCRs: Role, Relevance, and Localization (2023)
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A molecular dynamics study of the FGF1/FGF2 heterodimer in human fibroblasts (2023)
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Cholesterol in Class C GPCRs: Role, Relevance, and Localization (2023)
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Molecular dynamics investigation of the ph-dependent influenza hemagglutinin conformational change (2022)
Collaboration Network
Top Collaborators
Mahmoud Moradi
University of Arkansas at Fayetteville
16 shared publications
In database
- Cholesterol in Class C GPCRs: Role, Relevance, and Localization
- The Alternating Access Mechanism in Mammalian Multidrug Resistance Transporters and Their Bacterial Homologs
- Cholesterol in Class C GPCRs: Role, Relevance, and Localization
- Deciphering the Inter-domain Decoupling in the Gram-negative Bacterial Membrane Insertase
- Molecular Dynamics Investigation of the Influenza Hemagglutinin Conformational Changes in Acidic pH
Showing 5 of 16 shared publications
Ehsaneh Khodadadi
University of Arkansas at Fayetteville
6 shared publications
In database
- Cholesterol in Class C GPCRs: Role, Relevance, and Localization
- The Alternating Access Mechanism in Mammalian Multidrug Resistance Transporters and Their Bacterial Homologs
- Cholesterol in Class C GPCRs: Role, Relevance, and Localization
- Cholesterol-regulated conformational dynamics and stability of mGluR2 embedded in detergent micelles: Insights from molecular dynamics
- BPS2025 - Cholesterol-modulated conformational dynamics of mGluR2 in active and inactive states
Showing 5 of 6 shared publications
Ugochi H. Isu
University of Arkansas at Fayetteville
5 shared publications
In database
- Cholesterol in Class C GPCRs: Role, Relevance, and Localization
- The Alternating Access Mechanism in Mammalian Multidrug Resistance Transporters and Their Bacterial Homologs
- Cholesterol in Class C GPCRs: Role, Relevance, and Localization
- Cholesterol Dependence of the Conformational Changes in Metabotropic Glutamate Receptor 1
- Cholesterol-regulated conformational dynamics and stability of mGluR2 embedded in detergent micelles: Insights from molecular dynamics
Adithya Polasa
University of Arkansas at Fayetteville
4 shared publications
In database
- Deciphering the Inter-domain Decoupling in the Gram-negative Bacterial Membrane Insertase
- Deciphering the Interdomain Coupling in a Gram-Negative Bacterial Membrane Insertase
- Cholesterol Dependence of the Conformational Changes in Metabotropic Glutamate Receptor 1
- Molecular dynamics investigation of the ph-dependent influenza hemagglutinin conformational change
Mortaza Derakhshani-Molayousefi
2 shared publications
In database
- Cholesterol Dependence of the Conformational Changes in Metabotropic Glutamate Receptor 1
- BPS2025 - Elucidating LasR conformational dynamics: Molecular insights into quorum sensing inhibition in Psedomonas aeruginosa
Vivek Govind Kumar
University of Arkansas at Fayetteville
2 shared publications
In database
- Molecular Dynamics Investigation of the Influenza Hemagglutinin Conformational Changes in Acidic pH
- Molecular dynamics investigation of the influenza hemagglutinin conformational changes in acidic pH
Ehsan Khodadadi
University of Arkansas at Fayetteville (US)
2 shared publications
- BPS2025 - Cholesterol-modulated conformational dynamics of mGluR2 in active and inactive states
- Lipid-Mediated Modulation of mGluR2 Embedded in Micelle and Bilayer Environments: Insights from Molecular Dynamics
Vivek Govid Kumar
University of Arkansas at Fayetteville (US)
1 shared publication
- Molecular dynamics investigation of the ph-dependent influenza hemagglutinin conformational change
Ashkan F. Ghaan
North Carolina State University (US)
1 shared publication
- Cholesterol-regulated conformational dynamics and stability of mGluR2 embedded in detergent micelles: Insights from molecular dynamics
Seyed Hamid Tabari
University of Arkansas at Fayetteville
1 shared publication
In database
- Cholesterol Dependence of the Conformational Changes in Metabotropic Glutamate Receptor 1
Jeevapani J. Hettige
University of Arkansas at Fayetteville (US)
1 shared publication
- Lipid-dependent conformational dynamics of bacterial ATP-binding cassette transporter Sav1866
Mercede Furr
University of Arkansas at Fayetteville
1 shared publication
In database
- Structural Stability Comparisons Between Natural and Engineered Group II Chaperonins: Are Crenarchaeal “Heat Shock” Proteins Also “pH Shock” Resistant?
Sreenivasulu Basha
University of Arkansas at Fayetteville (US)
1 shared publication
- Structural Stability Comparisons Between Natural and Engineered Group II Chaperonins: Are Crenarchaeal “Heat Shock” Proteins Also “pH Shock” Resistant?
Shilpi Agrawal
University of Arkansas at Fayetteville
1 shared publication
In database
- Structural Stability Comparisons Between Natural and Engineered Group II Chaperonins: Are Crenarchaeal “Heat Shock” Proteins Also “pH Shock” Resistant?
Zeina Alraawi
University of Arkansas at Fayetteville
1 shared publication
In database
- Structural Stability Comparisons Between Natural and Engineered Group II Chaperonins: Are Crenarchaeal “Heat Shock” Proteins Also “pH Shock” Resistant?
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