Match tier
Likely match
Presence
Current · Arkansas
Last published
2024
Sources
OpenAlex · ORCID
Refreshed
2026-10-06
V
Vivek Govind Kumar
This is a likely match — the affiliation was inferred from OpenAlex, ORCID, and web sources but has not been fully confirmed. Treat with appropriate caution.
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7 h-index
32 pubs
190 cited
Research Areas
Biomedical Subjects
Links
Biography and Research Information
OverviewAI-generated summary
Vivek Govind Kumar's research employs molecular dynamics simulations to investigate protein structure and dynamics. His work has focused on understanding the conformational changes of viral proteins, such as the SARS-CoV-2 spike protein and influenza hemagglutinin. He also studies the stabilization mechanisms of human proteins, including fibroblast growth factor 1, by examining their interactions with molecules like heparin. Kumar's research addresses fundamental questions about protein folding, binding affinities, and the forces that govern protein stability and reversibility. His publication record includes studies on intrinsically disordered protein regions and the structural insights gained from combining experimental and computational approaches. Kumar collaborates with researchers at the University of Arkansas at Fayetteville and the University of Arkansas at Little Rock, with shared publications numbering as high as 14 with Mahmoud Moradi.
Metrics
- h-index: 7
- Publications: 32
- Citations: 190
Selected Publications
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Molecular Dynamics Investigation of the Influenza Hemagglutinin Conformational Changes in Acidic pH (2024)
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Molecular dynamics investigation of the influenza hemagglutinin conformational changes in acidic pH (2024)
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A purely physics-based computational binding affinity estimation from restrained umbrella sampling simulations (2024)
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cpSRP43 Is Both Highly Flexible and Stable: Structural Insights Using a Combined Experimental and Computational Approach (2023)
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Structural effects of ALS-associated mutations on profilin (2023)
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Binding affinity estimation from restrained umbrella sampling simulations (2022)
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Binding Affinity Estimation from Restrained Umbrella Sampling Simulations (2022)
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Prefusion spike protein conformational changes are slower in SARS-CoV-2 than in SARS-CoV-1 (2022)
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Molecular dynamics investigation of the ph-dependent influenza hemagglutinin conformational change (2022)
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Characterizing the roles of chemo-mechanical couplings in the differential behavior of SARS-CoV-1 and SARS-CoV-2 spike glycoprotein (2022)
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cpSRP43 is both highly flexible and stable: Structural insights using a combined experimental and computational approach (2022)
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Binding Affinity Estimation From Restrained Umbrella Sampling Simulations (2021)
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Mechanistic Picture for Monomeric Human Fibroblast Growth Factor 1 Stabilization by Heparin Binding (2021)
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Transient local secondary structure in the intrinsically disordered C-term of the Albino3 insertase (2021)
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Characterization of the structural forces governing the reversibility of the thermal unfolding of the human acidic fibroblast growth factor (2021)
Collaboration Network
Top Collaborators
Mahmoud Moradi
University of Arkansas at Fayetteville
31 shared publications
In database
- Binding affinity estimation from restrained umbrella sampling simulations
- Prefusion spike protein conformational changes are slower in SARS-CoV-2 than in SARS-CoV-1
- ALS-causing mutations in profilin-1 alter its conformational dynamics: A computational approach to explain propensity for aggregation
- The Role of a Crystallographically Unresolved Cytoplasmic Loop in Stabilizing the Bacterial Membrane Insertase YidC2
- Characterization of the structural forces governing the reversibility of the thermal unfolding of the human acidic fibroblast growth factor
Showing 5 of 31 shared publications
Thallapuranam Krishnaswamy Suresh Kumar
University of Arkansas at Fayetteville
10 shared publications
In database
- Binding affinity estimation from restrained umbrella sampling simulations
- Characterization of the structural forces governing the reversibility of the thermal unfolding of the human acidic fibroblast growth factor
- Mechanistic Picture for Monomeric Human Fibroblast Growth Factor 1 Stabilization by Heparin Binding
- Transient local secondary structure in the intrinsically disordered C-term of the Albino3 insertase
- Mechanistic Picture for Monomeric Human Fibroblast Growth Factor 1 Stabilization by Heparin Binding
Showing 5 of 10 shared publications
Adithya Polasa
University of Arkansas at Fayetteville
10 shared publications
In database
- Binding affinity estimation from restrained umbrella sampling simulations
- Prefusion spike protein conformational changes are slower in SARS-CoV-2 than in SARS-CoV-1
- Differential Dynamic Behavior of Prefusion Spike Proteins of SARS Coronaviruses 1 and 2
- Comparing the Dynamic Differences between X-ray and Cryo-EM Structures of Cannabinoid Receptor 1 using Molecular Dynamics Simulations
- cpSRP43 Is Both Highly Flexible and Stable: Structural Insights Using a Combined Experimental and Computational Approach
Showing 5 of 10 shared publications
Shilpi Agrawal
University of Arkansas at Fayetteville
7 shared publications
In database
- Binding affinity estimation from restrained umbrella sampling simulations
- Characterization of the structural forces governing the reversibility of the thermal unfolding of the human acidic fibroblast growth factor
- Mechanistic Picture for Monomeric Human Fibroblast Growth Factor 1 Stabilization by Heparin Binding
- Mechanistic Picture for Monomeric Human Fibroblast Growth Factor 1 Stabilization by Heparin Binding
- Binding Affinity Estimation from Restrained Umbrella Sampling Simulations
Showing 5 of 7 shared publications
Dylan S. Ogden
University of Arkansas at Fayetteville
6 shared publications
In database
- Prefusion spike protein conformational changes are slower in SARS-CoV-2 than in SARS-CoV-1
- Differential Dynamic Behavior of Prefusion Spike Proteins of SARS Coronaviruses 1 and 2
- Mechanistic Study of a Peptidase Containing ABC-Transporter, Employing Microsecond Level Molecular Dynamics Simulations and Enhanced Sampling Techniques
- An Investigation of the Influenza Hemagglutinin Membrane Fusion Process using Microsecond-Level MD Simulations
- Differential Dynamic Behavior of Prefusion Spike Glycoproteins of Sars Coronaviruses 1 and 2
Showing 5 of 6 shared publications
Ugochi H. Isu
University of Arkansas at Fayetteville
6 shared publications
In database
- Prefusion spike protein conformational changes are slower in SARS-CoV-2 than in SARS-CoV-1
- Differential Dynamic Behavior of Prefusion Spike Proteins of SARS Coronaviruses 1 and 2
- Comparing the Dynamic Differences between X-ray and Cryo-EM Structures of Cannabinoid Receptor 1 using Molecular Dynamics Simulations
- Effect of Cholesterol on the Structural Dynamics of Metabotropic Glutamate Receptor (mGluR1): A Molecular Dynamics Study
- Differential Dynamic Behavior of Prefusion Spike Glycoproteins of Sars Coronaviruses 1 and 2
Showing 5 of 6 shared publications
James Losey
University of Arkansas at Fayetteville
5 shared publications
In database
- Prefusion spike protein conformational changes are slower in SARS-CoV-2 than in SARS-CoV-1
- Differential Dynamic Behavior of Prefusion Spike Proteins of SARS Coronaviruses 1 and 2
- Transient local secondary structure in the intrinsically disordered C-term of the Albino3 insertase
- Differential Dynamic Behavior of Prefusion Spike Glycoproteins of Sars Coronaviruses 1 and 2
- Integrating Molecular Dynamics and smFRET Data to Study the Conformational Ensemble of the C-Terminus of Albino3 Protein
Mercede Furr
University of Arkansas at Fayetteville
4 shared publications
In database
- Transient local secondary structure in the intrinsically disordered C-term of the Albino3 insertase
- cpSRP43 Is Both Highly Flexible and Stable: Structural Insights Using a Combined Experimental and Computational Approach
- Integrating Molecular Dynamics and smFRET Data to Study the Conformational Ensemble of the C-Terminus of Albino3 Protein
- cpSRP43 is both highly flexible and stable: Structural insights using a combined experimental and computational approach
Colin D. Heyes
University of Arkansas at Fayetteville
4 shared publications
In database
- Transient local secondary structure in the intrinsically disordered C-term of the Albino3 insertase
- cpSRP43 Is Both Highly Flexible and Stable: Structural Insights Using a Combined Experimental and Computational Approach
- Integrating Molecular Dynamics and smFRET Data to Study the Conformational Ensemble of the C-Terminus of Albino3 Protein
- cpSRP43 is both highly flexible and stable: Structural insights using a combined experimental and computational approach
Seyed Hamid Tabari
University of Arkansas at Fayetteville
3 shared publications
In database
- The Role of a Crystallographically Unresolved Cytoplasmic Loop in Stabilizing the Bacterial Membrane Insertase YidC2
- The Role of a Crystallographically Unresolved Cytoplasmic Loop in Stabilizing the Bacterial Membrane Insertase YidC2
- Effect of Cholesterol on the Structural Dynamics of Metabotropic Glutamate Receptor (mGluR1): A Molecular Dynamics Study
Shadi A. Badiee
University of Arkansas at Fayetteville
3 shared publications
In database
- Molecular Dynamics Investigation of the Influenza Hemagglutinin Conformational Changes in Acidic pH
- Molecular dynamics investigation of the ph-dependent influenza hemagglutinin conformational change
- Molecular dynamics investigation of the influenza hemagglutinin conformational changes in acidic pH
Thomas Harkey
University of Arkansas at Fayetteville
2 shared publications
In database
- The Role of a Crystallographically Unresolved Cytoplasmic Loop in Stabilizing the Bacterial Membrane Insertase YidC2
- The Role of a Crystallographically Unresolved Cytoplasmic Loop in Stabilizing the Bacterial Membrane Insertase YidC2
Jeevapani J. Hettige
University of Arkansas at Fayetteville
2 shared publications
In database
- The Role of a Crystallographically Unresolved Cytoplasmic Loop in Stabilizing the Bacterial Membrane Insertase YidC2
- The Role of a Crystallographically Unresolved Cytoplasmic Loop in Stabilizing the Bacterial Membrane Insertase YidC2
Kalyan Immadisetty
University of Arkansas at Fayetteville (US)
2 shared publications
- The Role of a Crystallographically Unresolved Cytoplasmic Loop in Stabilizing the Bacterial Membrane Insertase YidC2
- The Role of a Crystallographically Unresolved Cytoplasmic Loop in Stabilizing the Bacterial Membrane Insertase YidC2
Ralph Henry
University of Arkansas at Fayetteville (US)
2 shared publications
- Transient local secondary structure in the intrinsically disordered C-term of the Albino3 insertase
- An Effective Electric Dipole Model for Voltage-induced Gating Mechanism of Lysenin
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