Ying Chen
Postdoctoral Associate
Also affiliated: BGI Group (China) (2024); Wannan Medical College (2025); Xihua University (2019); Ningbo University (2020); Hebei University of Economics and Business (2008); Guangzhou University of Chinese Medicine (2023); Shandong University of Technology (2022–2024); University of Science and Technology of China (2025); United States Food and Drug Administration (2023); Zhejiang Sci-Tech University (2023); Binzhou Medical University (2019); Shenyang Agricultural University (2018–2020); Tibet University (2024); Foshan University (2019); Binzhou University (2019); Southwest Petroleum University (2022); Huaibei Normal University (2020); Nanjing Forestry University (2010); Hunan Normal University (2021–2024); Guangdong Medical College (2025); Guizhou University (2018–2020); Northeast Normal University (2020–2021); Yunnan University (2016); Shaoxing University (2006); Loyola University Chicago (2012); Chinese Academy of Sciences (2008–2025); Chinese Academy of Medical Sciences & Peking Union Medical College (2016); Huazhong Agricultural University (2019–2025); Harbin Institute of Technology (2024); Hainan University (2022); Committee on Climate Change (2008); Peking Union Medical College Hospital (2016); Leshan Normal University (2019); Sanda University (2025); University of Chicago (2005–2012); Rice Research Institute (2025); Changchun Institute of Applied Chemistry (2025); Jiangsu University of Science and Technology (2022); Institute of Plant Protection (2023–2025); Institute of Oceanology (2022–2023); South China Sea Institute Of Oceanology (2022–2023); Shandong Academy of Agricultural Sciences (2023); Shanghai Institutes for Biological Sciences (2013); Jiaxing Hengchuang Electric Design and Research Institute (2025); Institute of Applied Ecology (2008); Anhui Academy of Agricultural Sciences (2023–2025); State Key Laboratory of Plant Genomics (2018–2021); China Special Equipment Inspection and Research Institute (2002); Shanghai Pesticide Research Institute (2025); South China Botanical Garden (2014); ShangHai JiAi Genetics & IVF Institute (2022); Dongguan People’s Hospital (2025); Institute of Genetics and Developmental Biology (2018–2021); Henan Provincial People's Hospital (2025); Changsha Hospital for Maternal and Child Health Care (2021); Chinese Academy of Agricultural Sciences (2017); Center for Excellence in Molecular Plant Sciences (2013); Air Force General Hospital PLA (2008); Research Center for Eco-Environmental Sciences (2022); Bioengineering Center (2019); China National GeneBank (2019); Institute of Crop Sciences (2017); Henan Institute of Science and Technology (2014); University of Chinese Academy of Sciences (2018–2024); BGI Research (2024); State Key Laboratory of Electroanalytical Chemistry (2025); University of Manitoba (2025); Northeast Forestry University (2022); China Agricultural University (2020–2025); University of Rochester (2000); China Jiliang University (2017); Changsha University of Science and Technology (2013); Ocean University of China (2022); Harbin Veterinary Research Institute (2025); Shandong Agricultural University (2023–2024); Shaanxi University of Chinese Medicine (2018); Taizhou University (2010–2021); Jinzhou Medical University (2023–2024); Xi'an Jiaotong University (2025); Nanjing University of Aeronautics and Astronautics (2024–2025); KU Leuven (2002)
Postdoc Researcher
Upstream record may be merged OpenAlex, the source of these figures, lists 140 institutions in 10 countries for this author record — a pattern that usually means it combines several researchers with similar names. The totals above may include work by other people.
Research Areas
Biomedical Subjects
Links
Biography and Research Information
OverviewAI-generated summary
Ying Chen's research focuses on the application and evaluation of molecular biology techniques, particularly long-read RNA sequencing (RNA-seq) for transcript identification and quantification. Chen has investigated methods for analyzing RNA-seq data, including the development and benchmarking of tools like Bambu for context-aware transcript quantification. Their work has explored the utility of Nanopore long-read RNA sequencing in human cell lines, contributing to a systematic assessment of these methods.
Chen has also contributed to research in toxicology and disease mechanisms. This includes studies on genetic toxicity testing using in vitro human airway cultures, assessing DNA damage and mutagenesis. Additionally, Chen has explored the amelioration of hyperuricemia in mice through interventions that alter gut microbiota and restore metabolic profiles. Their publication record includes work on evaluating metabolic features using deep learning models and contributions to the understanding of plant gene expression.
Metrics
- h-index: 23
- Publications: 113
- Citations: 1,809
Selected Publications
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N-nitroso-ethylisopropylamine mutagenicity in rat liver using the cII transgenic mutation assay and duplex sequencing analysis of genomic DNA (2025)
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Germline mutagenicity of molnupiravir and its active form, β-d-N4-hydroxycytidine, in Caenorhabditis elegans evaluated using whole-genome sequencing (2025)
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Repeat treatment of organotypic airway cultures with ethyl methanesulfonate causes accumulation of somatic cell mutations without expansion of bronchial-carcinoma-specific cancer driver mutations (2024)
Collaboration Network
Top Collaborators
- Genetic toxicity testing using human in vitro organotypic airway cultures: Assessing <scp>DNA</scp> damage with the <scp>CometChip</scp> and mutagenesis by Duplex Sequencing
- Repeat treatment of organotypic airway cultures with ethyl methanesulfonate causes accumulation of somatic cell mutations without expansion of bronchial-carcinoma-specific cancer driver mutations
- Evaluation of mutagenic susceptibility of different stages in germ cell development of Caenorhabditis elegans using whole genome sequencing
- Germline mutagenicity of molnupiravir and its active form, β-d-N4-hydroxycytidine, in Caenorhabditis elegans evaluated using whole-genome sequencing
- Genetic toxicity testing using human in vitro organotypic airway cultures: Assessing <scp>DNA</scp> damage with the <scp>CometChip</scp> and mutagenesis by Duplex Sequencing
- Repeat treatment of organotypic airway cultures with ethyl methanesulfonate causes accumulation of somatic cell mutations without expansion of bronchial-carcinoma-specific cancer driver mutations
- N-nitroso-ethylisopropylamine mutagenicity in rat liver using the cII transgenic mutation assay and duplex sequencing analysis of genomic DNA
- Evaluation of mutagenic susceptibility of different stages in germ cell development of Caenorhabditis elegans using whole genome sequencing
- Germline mutagenicity of molnupiravir and its active form, β-d-N4-hydroxycytidine, in Caenorhabditis elegans evaluated using whole-genome sequencing
- N-nitroso-ethylisopropylamine mutagenicity in rat liver using the cII transgenic mutation assay and duplex sequencing analysis of genomic DNA
- Genetic toxicity testing using human in vitro organotypic airway cultures: Assessing <scp>DNA</scp> damage with the <scp>CometChip</scp> and mutagenesis by Duplex Sequencing
- Repeat treatment of organotypic airway cultures with ethyl methanesulfonate causes accumulation of somatic cell mutations without expansion of bronchial-carcinoma-specific cancer driver mutations
- Genetic toxicity testing using human in vitro organotypic airway cultures: Assessing <scp>DNA</scp> damage with the <scp>CometChip</scp> and mutagenesis by Duplex Sequencing
- Repeat treatment of organotypic airway cultures with ethyl methanesulfonate causes accumulation of somatic cell mutations without expansion of bronchial-carcinoma-specific cancer driver mutations
- Genetic toxicity testing using human in vitro organotypic airway cultures: Assessing <scp>DNA</scp> damage with the <scp>CometChip</scp> and mutagenesis by Duplex Sequencing
- Repeat treatment of organotypic airway cultures with ethyl methanesulfonate causes accumulation of somatic cell mutations without expansion of bronchial-carcinoma-specific cancer driver mutations
- Genetic toxicity testing using human in vitro organotypic airway cultures: Assessing <scp>DNA</scp> damage with the <scp>CometChip</scp> and mutagenesis by Duplex Sequencing
- Repeat treatment of organotypic airway cultures with ethyl methanesulfonate causes accumulation of somatic cell mutations without expansion of bronchial-carcinoma-specific cancer driver mutations
- Genetic toxicity testing using human in vitro organotypic airway cultures: Assessing <scp>DNA</scp> damage with the <scp>CometChip</scp> and mutagenesis by Duplex Sequencing
- Repeat treatment of organotypic airway cultures with ethyl methanesulfonate causes accumulation of somatic cell mutations without expansion of bronchial-carcinoma-specific cancer driver mutations
- Genetic toxicity testing using human in vitro organotypic airway cultures: Assessing <scp>DNA</scp> damage with the <scp>CometChip</scp> and mutagenesis by Duplex Sequencing
- Repeat treatment of organotypic airway cultures with ethyl methanesulfonate causes accumulation of somatic cell mutations without expansion of bronchial-carcinoma-specific cancer driver mutations
- Evaluation of mutagenic susceptibility of different stages in germ cell development of Caenorhabditis elegans using whole genome sequencing
- Germline mutagenicity of molnupiravir and its active form, β-d-N4-hydroxycytidine, in Caenorhabditis elegans evaluated using whole-genome sequencing
- Germline mutagenicity of molnupiravir and its active form, β-d-N4-hydroxycytidine, in Caenorhabditis elegans evaluated using whole-genome sequencing
- N-nitroso-ethylisopropylamine mutagenicity in rat liver using the cII transgenic mutation assay and duplex sequencing analysis of genomic DNA
- Genetic toxicity testing using human in vitro organotypic airway cultures: Assessing <scp>DNA</scp> damage with the <scp>CometChip</scp> and mutagenesis by Duplex Sequencing
- Genetic toxicity testing using human in vitro organotypic airway cultures: Assessing <scp>DNA</scp> damage with the <scp>CometChip</scp> and mutagenesis by Duplex Sequencing
- Genetic toxicity testing using human in vitro organotypic airway cultures: Assessing <scp>DNA</scp> damage with the <scp>CometChip</scp> and mutagenesis by Duplex Sequencing
- Genetic toxicity testing using human in vitro organotypic airway cultures: Assessing <scp>DNA</scp> damage with the <scp>CometChip</scp> and mutagenesis by Duplex Sequencing
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